Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00247 ATGGTGACTGAACAGAGAACACCAGAGGAGTCGAAGGTGGCGGCGTTGGAGAGCAGTGGAACAATGAGTGGACCCCTCGTCGAAGCCGCCGAAGGGACCCGCCGGCGCCGGAGGGTGGAGGCCATGCAATTGGTTCTGAGAGCATTGTGCATGGCCTCCTCTGTTGTTGCCATCTCACTAATGGTCACTGCCAAGGAATCTAGCTCTGTCTCCATCTATGGCTTTCTCTTACCTCTTCACTCCAAGTGGTCTTTCTCTGAGTCCTATCAATATCTTGTTGGGGTTTCAGCTGCTGTCGCAGCGCATTCCTTGTTGCAACTACTGATTGGCACATCGAGATTTCTTAGGATGTCTTCTGTGATTCCTTCCAGAAATCATGCATGGCTTATTTTTGCTGGGGATCAGGCATTTGCTTATGCATTGATGAGTGCTGGATCTGCTGCATCTGGAGTGACCAATCTGAATCGCACAGGAATTAGACACACGGCTCTGCCAAATTTTTGCAAGCCTTTGCACAAGTTTTGTGACCATGTTGCCATCTCAATAGCCTTCACTTTCACCAGCTGTTTTATTCTAGCTACCTCAGCTGTTCAGGATGTAATATGGCTATCCCAACACTGA 621 0.4911 MVTEQRTPEESKVAALESSGTMSGPLVEAAEGTRRRRRVEAMQLVLRALCMASSVVAISLMVTAKESSSVSIYGFLLPLHSKWSFSESYQYLVGVSAAVAAHSLLQLLIGTSRFLRMSSVIPSRNHAWLIFAGDQAFAYALMSAGSAASGVTNLNRTGIRHTALPNFCKPLHKFCDHVAISIAFTFTSCFILATSAVQDVIWLSQH 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00247 206 PANTHER CASP-LIKE PROTEIN 3A2 6 205 - -
Cca11g00247 206 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 44 193 IPR006459 -
Cca11g00247 206 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 6 205 - -
Cca11g00247 206 MobiDBLite consensus disorder prediction 1 20 - -
Cca11g00247 206 MobiDBLite consensus disorder prediction 1 18 - -
Cca11g00247 206 Pfam Casparian strip membrane protein domain 37 190 IPR006702 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00247 37 206 Miscellaneous Gene Families AT3G16300 53.529 3.33e-57 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00247 - - gmx:100783028 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00247 11 3009990 3011850 Cca11g00247 11 3009990 3011850 ECH