Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00245 ATGAGTGGCGCAGGCGGTGCATTTGGTGGCAATAGGGGGCTCCGTCCAGTGCCTCCCGAAAAGGGGATATTCCCATTGGACCACATGCACTTGTGTGACTTAGAGAAAAGAGAATATATCAACTGTCTGAAGACCGCTTCACACCAGTCTGAGAAATGCAGGCAATTCTCCAAAAAATACCTCCAGTGTCGCATGGACAAGAACTTGATGGCAAAGCAAGACTTGGCTGAACTTGGTTTCAAGGAAAATAAAGTAGAAACTCCTTGA 267 0.4682 MSGAGGAFGGNRGLRPVPPEKGIFPLDHMHLCDLEKREYINCLKTASHQSEKCRQFSKKYLQCRMDKNLMAKQDLAELGFKENKVETP 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00245 88 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 29 71 - -
Cca11g00245 88 Pfam CHCH domain 32 65 IPR010625 -
Cca11g00245 88 PANTHER CYTOCHROME C OXIDASE 19-1 4 83 - -
Cca11g00245 88 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX19-LIKE 4 83 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00245 K18183 - gmx:100787288 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00245 11 2950665 2953800 Cca11g00245 11 2950665 2953800 ECH