Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00244 ATGACACCGCTCCTTCATTATTTATCTGGTCGAACCGATGTTTCTTGCCCTTTTCTCTTCTCTTTTCCTATTTCCATGGCTACTCACTTCAATCTGCAACATCAACTATTCAACTACTCCAGATCCGTGGGATTAGATATCAGAAGAAAAACAACTGCTCACGCCCTTCAACATGTCAATTCAAATGGATTAGATGAGAGAAACAATACTTCTTTGAACAGTGGCCTGTTAGTTGGATCTTTTTCTGTATGTTACACTTCCTTAAAGAAGTGTTCCTCATTGACAGCGTCAACTAAGACTCATTTTTCCTGTACTGATCAAAGCAAAGAAGCAGATGAGATTACCAATGTTTCATCCAGTACCAGTAGTCAGCGAATGGAATTTAATAGAGTGGATTGTGTTGTGTGGTTATTGCATGAATCTTCTAGGAGCTTTTCGCAAGCTATCAACTCGCTTGGACTAGCAAGGAGTGGTCCTGCTCTTGCAATGGCTTGGATTGGGAAGGATGTGCATGAGTGGCATAGACGTATTGCTTATCAGGTTGCAGTTTATGCTTTAATGAAAGCAGCAATTGATTTGGAGATATTGCTTTCACACGACCGACTAAATGAATCTTCCCCTGTTAAAGAGATTTTGAGTCCATTAATGAATCAAATGGGAGAACACATTGAAATTCGACTGAAAATGAAGCATCCATATTTGGTGCAGTGGTTTAGAGACACTGAAATGCCGCAAATAGCAGGATATTTTATTGCACTTCTAAAAAAGTGGTCCGTGGAATATGCAGGAAGCGGTATTGCAGGAATTATTGTGGCTATAACCTGTTGTAGTGCAGTGGTGAAATTGAGCTCTAGGCGCAGCTGCTGCCACTTACCTGTATTGTCTTTCGAAGATGTTTTGGTCAAGCTCATGGATTTTTCACTCAGTCTTGCATCTCTGGACAAGTTACATCAGTTAGCAACTGAGGCAGGATTTGAACTAAATTTCTTGTCACATTTTGGTGGGAAGGTTTTTCCCAGTGATAAAACTGAGGACCTAGAGTTTTGGATCGGTTTGGCCCATAGGAAACTATTGAAAGCTTTCAGTGAAGAAAGCATGACTTCAAAGAAGCAAAATTTTCAGCAAAAGATTCCAACAGATAGTTTGGCCACATTAGGACTTTTTACATATCTTGGAAGAAGGACTAGAATATTTTTATCAGCAATGGGCATTAAGGATCTTGACGGAATAGTTAAGGACTTCCTCAGTTACTTGGAATGTGGCATTCTTTTCATTTATCCTGAATTTTCCTCAATCCGAGTGTATCAGTGTTTCATGGAGGTGGTAACTGATGAGATAGGATGGCTTGATTTTTATGCTTCATATGTTCAACTAAACTGCAAGGAGCAAAGGCCAAAACATAATGCACGCCAGGCAGAGAAAGAGATAATTTCTTCTGTAGTTTTTACTGTGTGCTATGATGTTTTCTCTGGGTTTGCGCACTTCAATCGCTCAACTCAACAGTCATTGGGCATAGCTTCACGGATGTACTTGCTTCAGTGTCAGGGTCTGCTAAGTATTTGTCTGCAAGATCACTGGGCTGCATATGACAAATCAGGTGAATCACTAAATATTGTGGATCATGCTGCATTTGACAACACGTCATATATGGGAAATATAAATGGACCCAAGTTACCTCTGGTGTATGAAGTGCAGCAGATGTCACATGATTTAACTACAGAAGGAAGTCCAAAGAGTAATTCTCGAAACAGTTGTATATTCAAAAAGGCTCCAATTCCAGCAATCACAAACAAGGAAACATATGGGAAAGATTCCTGCATTGACAAGCCAAATCGTCAGCGTGAAAGTTTTATCAAGAGATACAGCACCAAGTTGGCATCCACAAGTGCAGACCTCCGGATGGGTACTTTGTTGCTCTTCATAGACATCATGCTTGCCTTAGAGCTACTTGTAAGGAAAGTGCATGGCTACAAGCCTTCAGGAAGTCAACAAAAGAGGCTGAACAGAACTATCACAGACATAATTGTGCTAATTCCGGTGACAATCTTGATGCTACTTCCGGTAACAGCTATAGGCCATGCAGCTATCCTAGCAGCTATAAAGAAGTATATGCCATTCTTGATACCTTCCTCTTATTCTTCAGAGCGCTTGGATGTTGTAAAGCAAATAAAGCAAACTAGAGAGATGGCTGATCAGTTACATTTGGCACAGTTTGACCTTGAAGATCAACCAGCAACCATTTCTGGACTATGA 2253 0.4043 MTPLLHYLSGRTDVSCPFLFSFPISMATHFNLQHQLFNYSRSVGLDIRRKTTAHALQHVNSNGLDERNNTSLNSGLLVGSFSVCYTSLKKCSSLTASTKTHFSCTDQSKEADEITNVSSSTSSQRMEFNRVDCVVWLLHESSRSFSQAINSLGLARSGPALAMAWIGKDVHEWHRRIAYQVAVYALMKAAIDLEILLSHDRLNESSPVKEILSPLMNQMGEHIEIRLKMKHPYLVQWFRDTEMPQIAGYFIALLKKWSVEYAGSGIAGIIVAITCCSAVVKLSSRRSCCHLPVLSFEDVLVKLMDFSLSLASLDKLHQLATEAGFELNFLSHFGGKVFPSDKTEDLEFWIGLAHRKLLKAFSEESMTSKKQNFQQKIPTDSLATLGLFTYLGRRTRIFLSAMGIKDLDGIVKDFLSYLECGILFIYPEFSSIRVYQCFMEVVTDEIGWLDFYASYVQLNCKEQRPKHNARQAEKEIISSVVFTVCYDVFSGFAHFNRSTQQSLGIASRMYLLQCQGLLSICLQDHWAAYDKSGESLNIVDHAAFDNTSYMGNINGPKLPLVYEVQQMSHDLTTEGSPKSNSRNSCIFKKAPIPAITNKETYGKDSCIDKPNRQRESFIKRYSTKLASTSADLRMGTLLLFIDIMLALELLVRKVHGYKPSGSQQKRLNRTITDIIVLIPVTILMLLPVTAIGHAAILAAIKKYMPFLIPSSYSSERLDVVKQIKQTREMADQLHLAQFDLEDQPATISGL 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00244 750 PANTHER LETM1 AND EF-HAND DOMAIN-CONTAINING PROTEIN ANON-60DA ISOFORM 1 34 738 - -
Cca11g00244 750 PANTHER LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN 34 738 IPR044202 GO:0005743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00244 Cca-Chr11 2942837 2949642 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00244 - - ccaj:109807252 1484.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00244 11 2942837 2949642 Cca11g00244 11 2942837 2949642 ECH