Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00243 ATGCAGAGACATTCAGTGGCAGTTCGTCAATTGTTTCACTACAAGGGACAGTTGGATCCTTTGAAAGGTGATGCACTAAATAAGGCTGTGAGAGACACTGCTCATGAGGCTATATCTGCCATATTTTCAGAAGACAATAATAAGCCAGCACCTTCTGAAGATCTAAACCGGCGGATACAAGGGTTTGGGAATACAAACTATGAACCGCCAACAGAAGATAAGAAATCTTTTATCAGTGAGGTTGTTGGTATTGGAAGCGCTTCTATTAAGCAAGGACTTAATAGCTTAACACAGGGGCATTCGCTAATGAAGAATAATGATCCTGGAAGCTACAAGAGTCCAAATCTTCGAAGGTCGTTGACCAATGAAGCAGAACACAGTGACAGATATGAACCGGTCGCATATCGCAATGAAAGTCAAAGTAGTTTTGGAGTATCAAAGAATCAATCAACTGGTCCTTGGATTCAGGATTCAAGAATAAATAAGGTGGAAACAACAAATGGGGAATCTGGTGCAAGTTCTGTAGAGAGTAAGACAAGAGAGGAAAAGTTGTTGGAGACAATTGTAACTTCAGGAGGTGTTCGCCTGCAACCCACACGAGATGCCATTCAAGTTTTCCTAACAGAGGCTGCAAAATTGGATGCACTGGCTTTATGTCATGCCATTGAACTAAAGCTCCAATCTCCAATTTGGCAGGCATGTCTGTTATCTGTTTGTGTCCTTGAGGCCATCCTTAGAAAGAAGGATGATGATCATTTTTCACCGGTGGAATATTACTTCACTGAAAATAAAGATGTGGTGCTGAGATGTTCTGAATCTCCCCAAGCCTCTTTAAGGGAAAGGGCTATGAAGGTTACTGGTCTTTTAGGTGGAGGCCAACCAAATAGCTGGGCAATTAATTCAGAGAAGGCTGTAAAAACAGAAAATGCTACTGTTGCTGAGTTGCCTGACTTGATAGACACGGGTGATTCAAATGATTATCATGGAACCAATGACACTGTAAAGAGTACAGCTGATCAAAATATAGCAAATTTGACATCATCCAATCCTCCAGTTGATGATTTATTTGGAGATTTTAGTGGCTCTATTAGTGCTGTTCAAGAATCAAAAAGTGATGATGATCCTTTTGCTGATGTGTCATTTCACACTAGTGAGAACAATGAACATACAGATGATCTCTTTTCTGGGATGTCTGTTGGTGGTGATAAACAGGATGATCATGAGAGTCACAGGCAGGGGAATATAAGTGATCCTCAACTTATTGACATTTTTTCTTCCAATTCTGAGCAAGAAAACCATAAGGAGCTTGTTACTGATTTAATGTCTGGTCTGTCAATGGATGAAAATACATCAAGTATGAAGCAGAAGGGAACATCTCCTTCCCTGCAATCTGAATCTTTATTTTCAGGTTTAAATAACCACATCGCTGACAATACTTCAGGTGGCATATTGAACTCTCAGCCAGCGGGGTTCAATGCAAATCCCATGTTTTCTACTGGTCCTCTGCCTTATAATTTACAGCCTGGTTTCATGCTGAACCAACCCTATTTGTCCCAGCCTCTTAATTACGGTGCCATGGGAACTCTTTTGGCCCAGCAGCAACTCTTAGCTACAATGGCTAATTTCCAACACCTTAGTAATGTCAATGCGCGAGATGATGGTTTTGCTCAAATGGCTGGACCCAATGGAAGTTCACCTTTGCCAGACATATTTCAACCAAATTTGCAAACTCAAACACCTACCTCAATGATCAACACTTCAAAGAAAGAAGAAACTAAAGCATTTGACTTTATCTCGGATCATATTGCCTCCGCACGTGATTCAAGGAGAATGATTTAA 1839 0.4078 MQRHSVAVRQLFHYKGQLDPLKGDALNKAVRDTAHEAISAIFSEDNNKPAPSEDLNRRIQGFGNTNYEPPTEDKKSFISEVVGIGSASIKQGLNSLTQGHSLMKNNDPGSYKSPNLRRSLTNEAEHSDRYEPVAYRNESQSSFGVSKNQSTGPWIQDSRINKVETTNGESGASSVESKTREEKLLETIVTSGGVRLQPTRDAIQVFLTEAAKLDALALCHAIELKLQSPIWQACLLSVCVLEAILRKKDDDHFSPVEYYFTENKDVVLRCSESPQASLRERAMKVTGLLGGGQPNSWAINSEKAVKTENATVAELPDLIDTGDSNDYHGTNDTVKSTADQNIANLTSSNPPVDDLFGDFSGSISAVQESKSDDDPFADVSFHTSENNEHTDDLFSGMSVGGDKQDDHESHRQGNISDPQLIDIFSSNSEQENHKELVTDLMSGLSMDENTSSMKQKGTSPSLQSESLFSGLNNHIADNTSGGILNSQPAGFNANPMFSTGPLPYNLQPGFMLNQPYLSQPLNYGAMGTLLAQQQLLATMANFQHLSNVNARDDGFAQMAGPNGSSPLPDIFQPNLQTQTPTSMINTSKKEETKAFDFISDHIASARDSRRMI 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00243 612 MobiDBLite consensus disorder prediction 371 389 - -
Cca11g00243 612 PANTHER UNCHARACTERIZED 1 605 IPR039273 -
Cca11g00243 612 MobiDBLite consensus disorder prediction 366 417 - -
Cca11g00243 612 Gene3D - 1 52 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00243 Cca-Chr11 2936607 2941830 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00243 - - gmx:100790466 1053.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00243 11 2936607 2941830 Cca11g00243 11 2936607 2941830 ECH