Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00240 ATGGCTTGGTCTCTCCTCCAAAACCCAACCTTCCTTAAACCCCAATCTTCTATACTCCCACCCAAGGCCCCAACCGTGACAACCACGCGCGGGGGTTACATTCCGGTGCGGTGCGGCGGACCGCGGTCCCAGCGTGGACCGCTGGTGAAAGGCCGAATCTTGAGCATCGAAGCTATCCAAGCCATTCAAACCCTCAAGCGCCTAAACCGAACCAACCCTCCGAACCTCCCGGACCTCGTGTCCAACACCCTCACGCGCCTTATCAAGTTCGACCTCGTCGCTACCCTGCGGGAGCTCCTACGCCAGCAGCAGTGCACCCTCGCCCTCTGCGTATTCTCCACCCTCCGATCCGAATACGGCGCGGATCTCTCCCTCTACGCCGAGATGGTGCAGGCCCTCGCCGCCGCCGACATGCCGGAACACGTGGACCGTCTGATCCTCGACCTGGAGGACGCGGATGGGATCCGGTGCGACGATCCCAAGGGGCTCGTGAGTTTGATCAAGGCCGTTGTTGGTGCCAAGAGGAGAGAATCGACGGTGAGGATTTACGGGCTGATGAAGAAGAGTGGATATGGGTCGGTTGTTGAGGCCGATGAGTATGTGGTTAAGGTTTTGGTTAATGGGCTCAAGAGTTTCGGGGAAGAGGCCCTTGCTAAAGAACTTCGCCATGAATACACAAAGACGCTTCCTAAGTTCTCTAGGGCCCAATTCGATACGTTGACCATTTAG 729 0.5761 MAWSLLQNPTFLKPQSSILPPKAPTVTTTRGGYIPVRCGGPRSQRGPLVKGRILSIEAIQAIQTLKRLNRTNPPNLPDLVSNTLTRLIKFDLVATLRELLRQQQCTLALCVFSTLRSEYGADLSLYAEMVQALAAADMPEHVDRLILDLEDADGIRCDDPKGLVSLIKAVVGAKRRESTVRIYGLMKKSGYGSVVEADEYVVKVLVNGLKSFGEEALAKELRHEYTKTLPKFSRAQFDTLTI 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00240 242 Gene3D Tetratricopeptide repeat domain 53 228 IPR011990 GO:0005515
Cca11g00240 242 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 5 233 IPR044190 GO:0000373|GO:0003723|GO:0009658
Cca11g00240 242 PANTHER PROTEIN THYLAKOID ASSEMBLY 8, CHLOROPLASTIC 5 233 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00240 - - gmx:100788379 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00240 11 2899748 2900864 Cca11g00240 11 2899748 2900864 ECH