Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00237 ATGAACATGGCAGGTTGTTCCACTTTTGTGAGATTGCCACATAATCCACCACACTTCAATCTTTCACCCCCTCCATTTCTCAACCCCGATTTTAGCTTTCGTGGGTCCAACACCGTACATAATCACCGACCCAATTGGCCCAAACCCTTGTCACTGCGCTCAAAATCTGCGCTTGCTGGAACTTACCCTTTGGAAATGCCAGATTGGAACCGCACGGCCCTTCTCGTGATCGACATGCAGAAAGATTTTATAGAAGATGGGGGTCCCATGCTAGTAAAAGGAGGGAAAGAAATTGTCCCAAATGTGATTAAGGCTGTGGAAGTTGCCAGGCAGCGTGGAATTCTCGTAGTTTGGGTGGTACGGGAACATGATCCCTTGGGAAGAGATGTTGAGCTCTTTCGCCGGCATCTATATACAGAGGGGAAAGTTGGTCCAACATCTGAAGGAAGTGAAGGTGCAGAACTAGTGGATGGCTTGGTAATTAAAGAAGGGGATTATAAACTTGTCAAGACCAGGTTTAGTGCATTCTTCGCTACACACCTTCATTCGGTCCTTCAAGGAGCAGGAATTAAAAGTCTGGTTGTCACTGGTGTTCAAACCCCTAACTGTATTAGGCAAACTGTCTATGATGCTGTAGCATTGGACTATCAACCTGTAACTGTTATTGTTGATGCTACCGCAGCTGCCACACCTGACATTCACCTTGCCAATTTGTCTGACATGAAAAATATTGGAGTTGCAACCCCAACATTACAAGAATGGAGCGAACCCAAAGCTTGA 780 0.459 MNMAGCSTFVRLPHNPPHFNLSPPPFLNPDFSFRGSNTVHNHRPNWPKPLSLRSKSALAGTYPLEMPDWNRTALLVIDMQKDFIEDGGPMLVKGGKEIVPNVIKAVEVARQRGILVVWVVREHDPLGRDVELFRRHLYTEGKVGPTSEGSEGAELVDGLVIKEGDYKLVKTRFSAFFATHLHSVLQGAGIKSLVVTGVQTPNCIRQTVYDAVALDYQPVTVIVDATAAATPDIHLANLSDMKNIGVATPTLQEWSEPKA 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00237 259 CDD cysteine_hydrolases 73 242 - -
Cca11g00237 259 Pfam Isochorismatase family 72 247 IPR000868 -
Cca11g00237 259 SUPERFAMILY Isochorismatase-like hydrolases 50 255 IPR036380 -
Cca11g00237 259 PANTHER OS02G0276400 PROTEIN 68 256 - -
Cca11g00237 259 Gene3D - 53 258 IPR036380 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00237 - - gmx:100527482 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00237 11 2842199 2845483 Cca11g00237 11 2842199 2845483 ECH