Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca11g00234 | ATGATACAGATTCTAGCCATTCGTGCTCAAGTTGAGGAATTAGTTGTGGATGAGGAAAGTTTAGCTTTCCTTGGGGAGATTGGACAACGGTCTTCTTTAAGGCATGCAGTTCAGCTGTTATCACCTGCCAGCATTGTTGCAAAAATGAATGGCCGAGACAACATCTGCAAGGCGGATCTTGATGAAGTTTGTTCGCTATATTTGGATGCCAAATCATCGGCCAAGTTACTTCAAGAGCAGCAGGAGAAATACATTTCATAA | 261 | 0.4253 | MIQILAIRAQVEELVVDEESLAFLGEIGQRSSLRHAVQLLSPASIVAKMNGRDNICKADLDEVCSLYLDAKSSAKLLQEQQEKYIS | 86 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca11g00234 | 86 | Gene3D | - | 1 | 86 | - | - | |
| Cca11g00234 | 86 | Pfam | TIP49 AAA-lid domain | 4 | 69 | IPR041048 | - | |
| Cca11g00234 | 86 | PANTHER | RUVB-LIKE HELICASE | 1 | 86 | - | - | |
| Cca11g00234 | 86 | PANTHER | RUVB-RELATED REPTIN AND PONTIN | 1 | 86 | IPR027238 | GO:0008094 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca11g00234 | K04499 | - | lja:Lj0g3v0116319.1 | 162.155 |