Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00230 ATGGCTTCCACTGTTGCAAGCTTGCCTTCACCATTGTTGCTCCCTGCTAGAAAATCACAATCAGGGAACTTCTCAACTTTCCCTGTTTCTCTTCTTTCAGGGAGACGAAAGCATGTTTCATTTATTGTGAAGGCTTCTGGAGAAAGTTCTGAATCTTCAACTACCCTTACTGTTTTTAAGTCTGTTCAGAATGTTTGGGAAACACCTGAGGACCGATTGGGACTTGTTGGTTTGGGATTTGCAGCCATAGCAGCGTTTTGGGCATCAACAAATTTTATTGCGGCCATTGACAAATTGCCACTTTTCCCAACTGTACTGGAATTAATTGGAATATTTTACTCAGTGTGGTTTACTTATCGCTATCTCGTATTCAAGCCTGACCGGGAAGAGCTTTTTCAAATCTTGAACAAGGCAGCATCAGATATCTTGGGCTAA 435 0.4184 MASTVASLPSPLLLPARKSQSGNFSTFPVSLLSGRRKHVSFIVKASGESSESSTTLTVFKSVQNVWETPEDRLGLVGLGFAAIAAFWASTNFIAAIDKLPLFPTVLELIGIFYSVWFTYRYLVFKPDREELFQILNKAASDILG 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00230 144 PANTHER - 1 144 IPR033344 GO:0009579
Cca11g00230 144 PANTHER PROTEIN CURVATURE THYLAKOID 1C, CHLOROPLASTIC 1 144 - -
Cca11g00230 144 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 61 144 IPR025564 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00230 Cca-Chr11 2788312 2791153 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00230 - - gmx:100306487 231.106