Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00228 ATGGCTTCTCTGGCAACCTTAGCTGCTGTTCAACCTGCTGCAGTCAATGGCCTTGCTGGAAGTTCCCTCACTGGAACTAAGCTCTCTTTCAAGCCCTCTCGCCACAGTTTCAAATCCAAGAATTTCAGGAGTGGTGCTGTGGTAGCAAAGTATGGTGACAAAAGTGTGTACTTTGATTTGGAGGATATTGGTAACACTACAGGGCAGTGGGACTTGTATGGCTCAGATGCACCTTCACCCTACAACCCTCTTCAGAGCAAATTCTTCGAGACATTTGCTGCCCCATTCACAAAGAGGGGATTGTTACTCAAGTTTCTGATATTAGGAGGAGGTTCTACCCTTGCATACTTCAGTGCAACAGCTTCAGGTGATATTCTACCAATCAAGAAGGGCCCACAACTTCCACCAAAGCTCGGTCCCCGTGGCAAGATCTAA 435 0.4736 MASLATLAAVQPAAVNGLAGSSLTGTKLSFKPSRHSFKSKNFRSGAVVAKYGDKSVYFDLEDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATASGDILPIKKGPQLPPKLGPRGKI 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00228 144 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC-LIKE 1 144 - -
Cca11g00228 144 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC 1 144 IPR004928 GO:0009522|GO:0009538|GO:0015979
Cca11g00228 144 Gene3D - 98 120 - -
Cca11g00228 144 Pfam Photosystem I reaction centre subunit VI 7 144 IPR004928 GO:0009522|GO:0009538|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00228 Cca-Chr11 2757219 2759029 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00228 K02695 - gmx:100499832 251.521