Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00218 ATGAACCGGCAGGGGCAGAGATCCGGTGCCACGGGGGTGCACCATAACCACCAGCACTCCGATCACTACCTCGACGCCTCCTCCAAGTGGTTTCACTCTTCCACCACTCACATTCCTCCTCTTCAGGACTACAATTTGTACGGTGGCGGAGGAAGAATGTTCCGGAACATCGCGCCGCAGAGGAGCTTCAACGAGTATTGCATGGATCCGTCCACGCCTCCTCGTAGTTTCGCCGTTAAGAAAAACGGCGACGAAGACGATTCGCCTCGCGATTTCAGCCCTGGCCTGTTGGATCTCCATTCGTTCGATACGGAGCTTCTTCCTCAGATGCCGAGCTCGAATATATACGATCCTGAACCTTACGTTTTCGGCAAACAAAATGTGAGAGCTCGCGCTTCGGAGAACAGTGTCTCCAATAGTCTTGCTGCGGAAAATGTGAAATCTAGCAATGTGGCTAAGATTAAAGTTGTGGTTCGCAAGAGACCACTGAATAAGAAGGAGATAGCTAAGCACGAGGAGGATATTATAGACACAGTTTCGAATTCTTTGACAGTGCACGAGACTAAACTTAAGGTTGACCTTACTCAGTATGTAGAGAAGCACGAATTTGTTTTTGATGCCGTCTTGAATGAAGAGGTTACAAATGATGAGGTGTATCGTGAAACGGTGGAGCCCATAGTTCCAATAATATTTCAACGCACTAAGGCAACGTGCTTTGCATATGGACAAACAGGGAGTGGAAAAACTTACACAATGAAGCCACTGCCTCTTAAAGCATCAAGGGACATATTGAGATTGATGCATCATACCTACAGGAATCAGGGATTTCAGCTGTTTGTGAGTTTCTTTGAAATATATGGTGGGAAGCTTTTTGATCTCCTTAATGATCGAAAAAAACTGTGCATGAGGGAGGATGGAAAGCAACAAGTTTGCATAGTTGGTTTGCAAGAGTACCGTGTATCAGATGTAGAGACCATCAAAGAACTGATTGAGCAAGGAAATGCCACAAGAAGTACTGGCACCACAGGGGCAAATGAGGAGTCTTCACGGTCACATGCAATACTTCAGCTTGCTATCAAGAAATCCGTTGATGGAAATGTATCCAAGCCTCCTCGTGTTGTTGGGAAACTCTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCGGATACCACAGATAATGACAAACAGACAAGAATAGAAGGCGCTGAGATCAATAAGAGCTTGCTTGCCTTAAAGGAATGCATAAGAGCTCTAGATAATGACCAAGGACACATCCCATTCAGAGGCAGTAAATTGACTGAAGTTCTGAGGGATTCATTTGTCGGCAATTCCCGCACTGTTATGATATCATGCATATCACCAAGTTCTGGTTCATGCGAACATACTCTGAATACATTAAGATATGCTGACAGGGTAAAAAGCTTATCAAAAGGGAACAATTCCAAGAAGGATGTTTTATCTTCAAACTTCAACCTTAAAGAATCAACTACCATTCCTTTGTCTTCCGTTAACACATATGCCTACGAGGATCGTGCATCTGATACATGGCCTGAAGAAAATGATGGGGAAGAATTTAGTCCTTCTGAAGATTACTGTGAACAGGTGAAACCATCATGGAAGAAAAATGGAAAGATAGAGCCATATGGAGCAACAGATGACAAATTTAAGAAACCCAATGGCCAGATCAAATGGAAGGACATCCCAAAAATTGAACCTAAAACAGTTCATTCAGATGATGATTTGAATGCCCTCTTACAGGAAGAAGAAGACCTTGTAAATGCTCACCGGAAACAAGTAGAGGAGACGATGAATATTGTTAAAGAGGAAATGAACCTGTTGGTTGAAGCAGATCAACCAGGCAATCAGCTGGATGATTATGTAGCAAAACTAAGTGCCGTTCTGTCTCAGAAGGCTGCTGGCATCATGCAGTTACAAACCCGTTTAGCTCATTTCCAGAAACGTTTAAAGGAGCATAACGTTTTGGCTTCATCTGCGGGTTACTAA 2007 0.4375 MNRQGQRSGATGVHHNHQHSDHYLDASSKWFHSSTTHIPPLQDYNLYGGGGRMFRNIAPQRSFNEYCMDPSTPPRSFAVKKNGDEDDSPRDFSPGLLDLHSFDTELLPQMPSSNIYDPEPYVFGKQNVRARASENSVSNSLAAENVKSSNVAKIKVVVRKRPLNKKEIAKHEEDIIDTVSNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVETIKELIEQGNATRSTGTTGANEESSRSHAILQLAIKKSVDGNVSKPPRVVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSKKDVLSSNFNLKESTTIPLSSVNTYAYEDRASDTWPEENDGEEFSPSEDYCEQVKPSWKKNGKIEPYGATDDKFKKPNGQIKWKDIPKIEPKTVHSDDDLNALLQEEEDLVNAHRKQVEETMNIVKEEMNLLVEADQPGNQLDDYVAKLSAVLSQKAAGIMQLQTRLAHFQKRLKEHNVLASSAGY 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00218 668 Coils Coil 586 617 - -
Cca11g00218 668 Pfam Kinesin motor domain 159 475 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca11g00218 668 Gene3D Kinesin motor domain 127 479 IPR036961 -
Cca11g00218 668 ProSitePatterns Kinesin motor domain signature. 375 386 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cca11g00218 668 SMART kinesin_4 151 482 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca11g00218 668 PRINTS Kinesin heavy chain signature 233 254 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca11g00218 668 PRINTS Kinesin heavy chain signature 342 359 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca11g00218 668 PRINTS Kinesin heavy chain signature 376 394 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca11g00218 668 PRINTS Kinesin heavy chain signature 426 447 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca11g00218 668 CDD KISc_KIF2_like 153 474 - -
Cca11g00218 668 ProSiteProfiles Kinesin motor domain profile. 153 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca11g00218 668 MobiDBLite consensus disorder prediction 79 93 - -
Cca11g00218 668 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 476 IPR027417 -
Cca11g00218 668 PANTHER KINESIN-LIKE PROTEIN KIN-13B 1 668 - -
Cca11g00218 668 PANTHER KINESIN-RELATED PROTEIN 6 1 668 - -
Cca11g00218 668 MobiDBLite consensus disorder prediction 65 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00218 Cca-Chr11 2660999 2665658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00218 152 476 Calmodulin-binding Proteins AT5G65930 34.030 2.13e-45 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00218 K10393 - gmx:100802651 1251.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00218 11 2660999 2665658 Cca11g00218 11 2660999 2665658 ECH