Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00209 ATGACGGTGAAGGCGTCAAGGTCAAAGTACAGAGGGTGCTGCTGGTTAAAAtggacggtggcggtgacggtgttcctggcgttggcgatagtggtatggccgtggAATCCAGAACTGAGGATCGAACGGCTGAACGTGAAGCGCGTGAAAGTGCACCCTCTGCCGCCGGTGGGTGCTGACGTGTTCATAGCGCTGTCGGTGAGAGTGCAGAACCGCGGCATGTACTGGCTGGAGCTGACGGATGTTGACGTGGGAGTGAAGTACAGAGGGAAGAAGATGGGGCACGTGGAATCGGAGGGGTGGCGCGTGAGGGGTTGGGGCACCACCCTTGTGGAGGGTGACCTCGAATTCAGTGGCCTTCCCTCCTCCGAAGTGGCCCATTTGCTTGAGGACCTCGCCAAGGGTAGAGTCTACTTTCACACTGTTGTCGAAGTCTCTGGACAAATTGGCTTTCTCTTAACTCCCATCCCTTATTTGTTCAAGACAATACTGGCATGTGAGGTTTTGGTGAATACAAAAAACCATTCAATTATTCTTCAACACTGTATGCACAAGGACTAA 561 0.4724 MTVKASRSKYRGCCWLKWTVAVTVFLALAIVVWPWNPELRIERLNVKRVKVHPLPPVGADVFIALSVRVQNRGMYWLELTDVDVGVKYRGKKMGHVESEGWRVRGWGTTLVEGDLEFSGLPSSEVAHLLEDLAKGRVYFHTVVEVSGQIGFLLTPIPYLFKTILACEVLVNTKNHSIILQHCMHKD 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00209 186 PANTHER EXPRESSED PROTEIN 6 185 - -
Cca11g00209 186 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 6 185 - -
Cca11g00209 186 SUPERFAMILY LEA14-like 21 119 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00209 - - gmx:100815479 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00209 11 2581605 2587796 Cca11g00209 11 2581605 2587796 ECH