Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00204 ATGTTCTATGGTGCGGTGGTATGGGACCCTTGGCTTATTGTTGCTCAAATTGTTTGTCTTCAATGTTTGTACTACATCACCCTGGGGTTGTTGTTGTCGATACTTGTTGGCACACGCGTGTCTCGGATGAGCCTCGTGTATTTCTTTGACTATGTTGCGGTTACTACCACTACCGTCACTGGTTGGTGTGTTATTGCTTCATTTCTGCTCAGCTCAGTTGCAGGGGCGGTGTACATGTTTTATTTGATTGAAAGATCAAAGAAGTGCTTGGATTTTTCAGCAACACTCTACATTGTCCATCTTTTTATATGCATTGTGTATGGGGGTTGGCCCTCCTCTTTAACATGGTGGATTGTGAATGGTTCTGGAATTGCAGTGATGGCTTTGCTAGGTGAACGTCTGTGCATAAAGCGTGAACTCCAGGAGATATCATTAACACGATATCGTTCAAATGTTTGA 459 0.4336 MFYGAVVWDPWLIVAQIVCLQCLYYITLGLLLSILVGTRVSRMSLVYFFDYVAVTTTTVTGWCVIASFLLSSVAGAVYMFYLIERSKKCLDFSATLYIVHLFICIVYGGWPSSLTWWIVNGSGIAVMALLGERLCIKRELQEISLTRYRSNV 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00204 152 Pfam Integral membrane protein S linking to the trans Golgi network 5 145 IPR019185 -
Cca11g00204 152 PANTHER PROTEIN SYS1 HOMOLOG 1 152 - -
Cca11g00204 152 PANTHER SYS1 1 152 IPR019185 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00204 K20318 - gmx:100817072 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00204 11 2519443 2524010 Cca11g00204 11 2519443 2524010 ECH