Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00197 ATGAATAAGGATACTATACTAATGGAGGATTGCAACAATAGAGGAGAAGTTCATGCAAATTCAACTAAGAACTCTTCATCCAGATTATCTATCAGTTTGAAATCCACGTTATCTGGAAGATCAACTCCACAACATTATTCTCCTTCTTTTCAGCGACCACATTCTGGTTTAACACCAAGAAGAGAAACCAAGGGTGGTGCACAGTGTTTTGGGAGCAACCGATTACTTCTGTGGCTGTTTCTGATTACCCTTTGGGCTTATCTTGGATTTTGTGTTCAATCTAGGTGGGCACATGATGATAATGATGAGGAATTTTCAGGCTTTGAAAGCAGGCAAAGTGATAGAACAAACTCATATATTGAACAGAATCGGCATCATGATTTGTTTGTCAAAAACATTTCCTTATCTGTTAGTATTGGAAGAGATGGGAACAAAACAATGAATGTGGCTTTGGCCAAGAAAGAATATGGTGTTCTATCTCAACTCAAGGCTAGCTCAAAGAAAAGGAGAAGATCAATGCGTGCTTTGAGAGGTAAGAGGAGGCGAAAACATAGAGTTGAGAGTGCTGGTATAGAGGAGCAAGGGCCAGAAATTCCTCAAAGGAATTCTACCTATGGATTCCTTGTTGGTCCATTTGGTTCAATAGAGGATAGAATTCTGCAATGGAGTCCTAAGAGGCGTTATGAAACGTGGGAAAGGAAAGGGGAGTTTGCAAGGCTTGTTTGGTCAAGAAGGTTTGTGTTGATATTTCATGAGCTTTCAATGACTGGGGCACCACTTTCAATGATGGAGTTGGGAACTGAACTCTTGAGTTGTGGGGCTTCTGTTTCAGCTGTGGTGCTTAGCAGGAAGGGTGGTTTGATGCAAGAACTTGGTAGGAGACAAATCAAGGTGCTTGATGACAAAGCATACCTCAGCTTCAAAACTGCAACCAAGGCAGATTTTGTCATTGCTGGATCAGCTGTCTGTGCATCATGGATTGAACAATACATTGAACATTTTCCTGCTGGTGCAAGTAAAGTTGCTTGGTGGATTATGGAAAACCGTCGAGAGTACTTTGATCGTGCAAAGAATGTGTTGCACAGAGTGAAGATATTGTTTTTTCTTTCTGAATTACAATCTAAGCAATGGCAAAAATGGTGTGAAGAAGAAGGCATAAAACTGAGATCAAAGCCTACACTTGTTCCTTTGTCTGTTAATGATGAACTAGCTTTTGTAGCCGGCATTCCCTCTACTCTTAACACTCCATCCTTCAGTGCTACAAAAATGGATGAGAAGAGAGAGTTGTTGCGAAATTCGGTCCGAAGAGAAATGGGGTTAACTGATACTGATATGCTTGTTATGACTCTGAGTAGCATCAACCGTGGAAAGGGTCAGCTATTGCTTCTTGAATCAGCAAGTTCAATAGTAGAACATGGACCATTGCACGACGATATGAAAATGCAAAACTCATCAGATGATAGCAGTGTAGACTTGAACAATACCTCAAGAAATTTTATAAACAGAAGGGAAGTGTTGTCCCACAACAATGGTTCAATGGCACAATCTCTCAAAATTCTCATTGGCTCCGTGGGATCTAAGAGTAACAAGGTCGATTATGTCAAAGGTCTTCTAAGTTTCTTAGCAAAGCATTCCAAATTGTCAAAGTCGGTTTTGTGGACCTCAGCCACAACACGTGTAGCCTCACTTTACTCTGCTGCAGATGTTTATGTCACAAACTCTCAGGGACTGGGAGAAACATTTGGACGTGTGACTATAGAAGCAATGGCATTTGGTCTTCCGGTGTTTGGAACAGATGCCGGAGGAACGCAAGAGATTGTTGATCATAATGTGACAGGTCTTCTTCATCCAATTGGACGCACAGGGAATCATGTCCTTGCACAGAATCTCCGGTATTTACTTGAAAACCGATTGGCAAGAGAGCAAATGGGGAATGAAGGAAGAAAAAAGGTGCAGAGGATGTTCTTGAAGCAGCACATGTATGAGAAATTTGTAGAGGTTCTTGTCATGTGCATGAGGAGCAAATAA 2028 0.4127 MNKDTILMEDCNNRGEVHANSTKNSSSRLSISLKSTLSGRSTPQHYSPSFQRPHSGLTPRRETKGGAQCFGSNRLLLWLFLITLWAYLGFCVQSRWAHDDNDEEFSGFESRQSDRTNSYIEQNRHHDLFVKNISLSVSIGRDGNKTMNVALAKKEYGVLSQLKASSKKRRRSMRALRGKRRRKHRVESAGIEEQGPEIPQRNSTYGFLVGPFGSIEDRILQWSPKRRYETWERKGEFARLVWSRRFVLIFHELSMTGAPLSMMELGTELLSCGASVSAVVLSRKGGLMQELGRRQIKVLDDKAYLSFKTATKADFVIAGSAVCASWIEQYIEHFPAGASKVAWWIMENRREYFDRAKNVLHRVKILFFLSELQSKQWQKWCEEEGIKLRSKPTLVPLSVNDELAFVAGIPSTLNTPSFSATKMDEKRELLRNSVRREMGLTDTDMLVMTLSSINRGKGQLLLLESASSIVEHGPLHDDMKMQNSSDDSSVDLNNTSRNFINRREVLSHNNGSMAQSLKILIGSVGSKSNKVDYVKGLLSFLAKHSKLSKSVLWTSATTRVASLYSAADVYVTNSQGLGETFGRVTIEAMAFGLPVFGTDAGGTQEIVDHNVTGLLHPIGRTGNHVLAQNLRYLLENRLAREQMGNEGRKKVQRMFLKQHMYEKFVEVLVMCMRSK 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00197 675 MobiDBLite consensus disorder prediction 38 64 - -
Cca11g00197 675 Pfam Glycosyl transferases group 1 538 649 IPR001296 GO:0016757
Cca11g00197 675 Pfam Glycosyl-transferase family 4 242 411 IPR041693 -
Cca11g00197 675 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 538 668 - -
Cca11g00197 675 Gene3D Glycogen Phosphorylase B; 418 655 - -
Cca11g00197 675 PANTHER BNAA05G14870D PROTEIN 8 675 - -
Cca11g00197 675 MobiDBLite consensus disorder prediction 38 56 - -
Cca11g00197 675 PANTHER BNAA05G14870D PROTEIN 8 675 - -
Cca11g00197 675 CDD GT4_PimA-like 245 668 - -
Cca11g00197 675 MobiDBLite consensus disorder prediction 169 195 - -
Cca11g00197 675 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 256 667 - -
Cca11g00197 675 MobiDBLite consensus disorder prediction 169 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00197 Cca-Chr11 2444205 2447908 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00197 32 673 Glycosyltransferase AT1G52420 60.121 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00197 - - gmx:100796443 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00197 11 2444205 2447908 Cca11g00197 11 2444205 2447908 ECH