Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00187 ATGGGTTCCCAAACAGTTTCCCAGGTTCCTATCGTTGACTTCACTCTTGATGAAGAGTTTAAACCTGGTTCAGCAAAATGGGCTTCTGCATGCCAAGTGATCCGTAGTGCACTTGAGGATCATGGTTGTTTTTATGCATTGTGTGATAAAGTTCCTATGGAGCTTCACAACTCAGTTTTTACTCTAATGGAACAACTCTTTGATCTTCCATCGGAAACAAAAATGCAAAAGATCAGTGACAAGCCCTACCATGGCTATTATGGACAAAATGTTCATGTCCCTCTATATGAATCCCTAGGGATCAATGATCCATCGACAGTGGAAGGAGTTCAAGAGTTCACAAAGCTAATGTGGCCAACAGGATATGATCATTTCTGTGAGACTCTGACTCTCTATGCAAAGGTGCTGGTAGAATTGGACCATATGACTAAAAGGATGGTGTTTGAAGGCTATGGTGTGGACCAAAGGCACTGTGATTCTCTTCTGGAATCAACAAAGTACATGCTTAGGAGCTTCAAATACAGACTGCCGCAGGAGGATGAAAATAATTTGGGACTGCATGCTCACACCGACACCTCCTTCTTTACCATTTTGCATCAGAATAATGTCAATGGTTTGCAAGTTAAATTGAAAAATGGAGAGTGGATTCATACTGATCCCTCACCCTTCATGTTTCTCATCCTCGCAGGTGATGCGTTTAAGGTTTGGAGCAACGATAGGATACAGTCTTGTGAACATCGAGTGATTATAAGTGCAAAGAAGGAAAGATACTCGATGGGACTATTTTCGCTTGGAGGCAAGATAGTTGAAACACAAGAAGAGCTAGTTGATGAAGAACATCCAAGACGTTATAAGCCATTTGATCATTATGAATACTTACGTTTCTATGCAACAAAGAAGGCCTCGGAATCAAAGTGTCGAATCAAAGAATTCTGCGGCATAGACTATGCTGATGAAAAGTGA 963 0.4123 MGSQTVSQVPIVDFTLDEEFKPGSAKWASACQVIRSALEDHGCFYALCDKVPMELHNSVFTLMEQLFDLPSETKMQKISDKPYHGYYGQNVHVPLYESLGINDPSTVEGVQEFTKLMWPTGYDHFCETLTLYAKVLVELDHMTKRMVFEGYGVDQRHCDSLLESTKYMLRSFKYRLPQEDENNLGLHAHTDTSFFTILHQNNVNGLQVKLKNGEWIHTDPSPFMFLILAGDAFKVWSNDRIQSCEHRVIISAKKERYSMGLFSLGGKIVETQEELVDEEHPRRYKPFDHYEYLRFYATKKASESKCRIKEFCGIDYADEK 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00187 320 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 313 - -
Cca11g00187 320 SUPERFAMILY Clavaminate synthase-like 6 300 - -
Cca11g00187 320 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 4 313 - -
Cca11g00187 320 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 88 IPR026992 -
Cca11g00187 320 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 165 266 IPR005123 -
Cca11g00187 320 Gene3D - 7 317 IPR027443 -
Cca11g00187 320 Pfam 2OG-Fe(II) oxygenase superfamily 174 262 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00187 Cca-Chr11 2290227 2293844 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00187 132 299 Glycosyltransferase AT5G59530 29.714 3.19e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00187 - - gmx:100794707 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00187 11 2290227 2293844 Cca11g00187 11 2290227 2293844 ECH