Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00185 ATGAAGTTTCCATTTTCAGCCATTATTTCCTTTTGGGTTGTTTGTGACATGTTGATCCTTGTTCTCGCAAATTCACGCTTCCCTGAGGGAATGTATAGTTTTGATCGAAATTCTCATGCAACCTATAAGTATGATCGCATGAGTGAAGTTCGGAAACAATGTGCTTCTGTGTTATCTGCTTCATCTGAATTGAGATATGAATATAGTGGGGTTATTGGTATGAAAGAAGAGCTTTCATTTGTGAATGGGGATTGGAGGCAGAATGGGGGTAAGTTTCCCATAATGCCATTTGATGCTGCCAAATCTCCTGGGACTTTGTCTGAAGACCACAGTCCCTTGAACTTGGTCTCTTTTTGGGTATCAGATGTTGATTATGACCACCGGTTGAAGAAGTCTATTCCCATCAATGGTTTCATGGTGATGGGCATTACTCGAGATGGTAATTTTGTGGACAAAACATTTGATGGGAATCCTGAGTTTCAGTTATGGCCTAGCCATTCTCAGCTCTCAATTCCCTTCCAAGGGGTTTATACTGAATCAAAGAAAAATGGTGGGGAAAGGGTGTTGTGTTTGTTAGGGAACACTATGCTTCCGACTCGAGAGGCCGACCCTGCCAAACCGTGGGAATGGATGAAGAATCCCGGTGAGATACCGTTGTCTGAAGATGATCAAATTATGCTAGTTCTTCGCTATCCAATGACATTCTCATTAACAAATAGGATGATCAATGGAGAGTTAAAAAGTTTGAACCGTGATTCCAATTCCAAATACTTTGATGTGGTTCGCATATCATCACAATTGGGAAAGTCGGCCAAGTATACATTTGGCTCACAACAGATTGTATCCAAAGCATGTAATCCATACCCATTTAAAGATAACCTGGTGGATGATGGCATTAGTGTCTACAAAGGGACAAGGTTTTGCGAAATCCTTGAAGAAATTACTAGAGAAAAACCTTTAACTGTTGTGCCGAACTGGAGATGCAATGGCACAGATGATTTCTGCAGTAAATTAGGTCCTTTTTTGACGGATAAGGAAATCAAATCAACAGATGGAGGCTTTCAAGATGTTAAACTTTATGTGCAGGATGTCATCTGTGAGCAAGCAGCTAGTAAGAGTAATACTGGTTCTGCTAGGGTATCAACGGTTTTTAGAGCAGTTTCACCATCAGAGAATCAGTATACTGCAGCAAAAAGATCTGGGCCTAGCAACACGTCTCTTGCCGCCGAAGGGATTTGGAAGTCTTCTAGCGGACAGCTTTGCATGGTTGGCTGCCTTGGATTTGTTGATGCCAAAGGGAGTAACTGTAATACCCGTATCTGTGTGTATATTCCTACCACTTTTTCCTTAAAGCAACATAGTATTATATTGGGAACTTTTTCTCCCATTAATAATAGTAGTGCCTTCTTTCCCCTATCATTTGAGCAACTAGTGCTACCTTCAGAACTCTGGAATTATTTCAGGCTCACTAATCCAAGTTACAGTTATTCTAAAACTAATTTGGCTGGTACTGTCCTAGAAAAAAATGAGCCCTTCAGTTTTTCAACTGTCATTAAGAAATCATTGCTAACATTTCCCAAACTTGAAGATAATGAGGCATTCCAAGATAGTTTGTCTCTTCTTTCAGAAGATCTCACGTTTCATGTCTCTGGCTTTGCTGACCATGCGCCTAATGTCCTGTCCCCTAGAGTTGACATTCAGATGGAGATTCTCTCCATTGGTCCCATGTTTGGACGCTATTGGTATGCTCAAAATGGTTCAACGTCTGAACAGGAAACACCATATCATGCCAAGGCTGCTGAATATACAGAAAGACAGCTTCTTGTAAATGTATCTGCACAACTCAGTCTTGCTGGAAAAGGTTATAGTAATTTTTCTGTGCTTTTTCTGGAGGGTCTTTATGATCCACATGTCGGAAAGATGTATCTAATTGGTTGCAGAGACGTGCGAGCCTCATGGAAAGTCTTATATCAGAGCTACGATCTTGAGGCTGGAATGGACTGTTTGATTGAGGTGGTAGTGGCTTATCCTCCTACAACAACTCGTTGGCTAGTCAATCCCAGAGCTACACTTTCGATAGAAAGCCAAAGGACTGAGGATGACGCCCTTCGGTTCAAATCAATAAAGCTCCAAACATTTCAAATTATATACAGGAAGCAACGCGAGGATGTCCTCTCACGCAAAGGTGTTGAAGGGATTCTCCGAATCTTGACACTTTCATTCGCGATTGGATGCATTTTAAGCCAACTGTTTTATATACAGCATAATGTGGATTCTCTTCCATATATCTCTCTTGTAGTGCTAGGTGTTCAAGCTCTTGGGTATAGCATTCCTCTGGTCACAGGTGCAGAAGCTCTTTTTAAGAAAATAGTTTCTGAATCTTATGATGTGCCATCTAATGAATTGGAGAGCAGTGAGTGGCTCCATGTCATTGATTACACTGTGAAACTGCTGTTGATTGTATCGTTGCTGGTAACTCTGCGGCTTTTTCAGAAGGTATGGAAGTCTCGCGTCAGATTGCAAACACGTACCCCTCTTGAGCCACATTGTGTCCCCAGTGATAAAAGGGTTCTTCTTTGTACCTTCATCATACATGTGGTAGGGTATGTAATTGTTCTAATAATTCACAGCACAAAGACCAGTCAGAAGGCTCTGGTTGATGGAGGAAAATCTCATTCATTGCCGGTTTGGGCCACAGAATTGGAAGAATATGTAGGTCTTGTTGAAGACTTTTTCTTGCTTCCTCAAATTATTGGGAACTTAATCTGGCATATTGATTGTAAGCCACTCAGAAAATTATATTTTATAGGAATCACCGTGGTCAGACTTCTTCCTCATATATATGATTACATTCGAGCTCCAGTTTCAAATCCTTACTTTTCTGAGGACTCTGAATTTGTCAATCCTAATTTGGATTTTTACTCAAAGTTTGGGGATATTGCCATTCCTGTGACTGCTATTATTCTTGCAATTGTGGTCTATATTCAACAAAGGTGGAGCTATGAAAAGCTGAGCCAGTTTCTGAAATTTGGGCAGTACAAGCTTCTCCCAACTTTCAGATACCAGAGGTTGTCCTCTAGGTCTTGTGAATCTGAACTAGTTCCTGGTATCAATGGTGGTGATGCTGCAAAAGAGAAAGAACAAGTTGATGTAGAATGA 3159 0.4087 MKFPFSAIISFWVVCDMLILVLANSRFPEGMYSFDRNSHATYKYDRMSEVRKQCASVLSASSELRYEYSGVIGMKEELSFVNGDWRQNGGKFPIMPFDAAKSPGTLSEDHSPLNLVSFWVSDVDYDHRLKKSIPINGFMVMGITRDGNFVDKTFDGNPEFQLWPSHSQLSIPFQGVYTESKKNGGERVLCLLGNTMLPTREADPAKPWEWMKNPGEIPLSEDDQIMLVLRYPMTFSLTNRMINGELKSLNRDSNSKYFDVVRISSQLGKSAKYTFGSQQIVSKACNPYPFKDNLVDDGISVYKGTRFCEILEEITREKPLTVVPNWRCNGTDDFCSKLGPFLTDKEIKSTDGGFQDVKLYVQDVICEQAASKSNTGSARVSTVFRAVSPSENQYTAAKRSGPSNTSLAAEGIWKSSSGQLCMVGCLGFVDAKGSNCNTRICVYIPTTFSLKQHSIILGTFSPINNSSAFFPLSFEQLVLPSELWNYFRLTNPSYSYSKTNLAGTVLEKNEPFSFSTVIKKSLLTFPKLEDNEAFQDSLSLLSEDLTFHVSGFADHAPNVLSPRVDIQMEILSIGPMFGRYWYAQNGSTSEQETPYHAKAAEYTERQLLVNVSAQLSLAGKGYSNFSVLFLEGLYDPHVGKMYLIGCRDVRASWKVLYQSYDLEAGMDCLIEVVVAYPPTTTRWLVNPRATLSIESQRTEDDALRFKSIKLQTFQIIYRKQREDVLSRKGVEGILRILTLSFAIGCILSQLFYIQHNVDSLPYISLVVLGVQALGYSIPLVTGAEALFKKIVSESYDVPSNELESSEWLHVIDYTVKLLLIVSLLVTLRLFQKVWKSRVRLQTRTPLEPHCVPSDKRVLLCTFIIHVVGYVIVLIIHSTKTSQKALVDGGKSHSLPVWATELEEYVGLVEDFFLLPQIIGNLIWHIDCKPLRKLYFIGITVVRLLPHIYDYIRAPVSNPYFSEDSEFVNPNLDFYSKFGDIAIPVTAIILAIVVYIQQRWSYEKLSQFLKFGQYKLLPTFRYQRLSSRSCESELVPGINGGDAAKEKEQVDVE 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00185 1052 PANTHER PII, URIDYLYLTRANSFERASE (DUF2921) 17 1035 - -
Cca11g00185 1052 Pfam Protein of unknown function (DUF2921) 52 1005 IPR021319 -
Cca11g00185 1052 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 17 1035 IPR021319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00185 Cca-Chr11 2265181 2268889 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00185 - - gmx:100794859 1856.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00185 11 2265181 2268889 Cca11g00185 11 2265181 2268889 ECH