Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00179 ATGGCAACCACACTCGCGTTTTTCCGCCCCACCCTGGTCCGGGCCTCCGCGGCTTCTCCATCCAAACCCGACCCCAACAGCAGGAAGCCCGTTTCCTCCAACTGGTGGGCTCCTTTGTTCGGATGGCCCGCAGATCCGGACTACATCGGCTCCGGCCCACCGCGGAAGCCGACCGGTAAACCGGATCCGGAAGTGGGCCGGCCCAGATCGAGGTTCGGAGCGGGGTGCTTCACGGAGGAGAAGGCAAAGGAGCTGCGGAAGAAGACCACGGAAACGTCGACGTTTCACGACATCATGTACCACTCCGCAATTGCGTCCAGACTCGCTTCCCAAGGTCAGCAGCACCACCGGTGTGTTGAAAAGAGTGTGTATGTTGTTACCCGTTACTTGTTAGCATTTCTCTCTGGTGCAAAAAGAAAAGTAAAAGCGAATAGCAACCGCTTTGAAGAGCCTGCCAGTTCCAATCCAAATTTGTGTCCAAGTTTTATTCATTTAAGAATAATGGGCTGGGCTTCCCTCCACCTCCAGAGTCCAGACCCTTAA 543 0.5543 MATTLAFFRPTLVRASAASPSKPDPNSRKPVSSNWWAPLFGWPADPDYIGSGPPRKPTGKPDPEVGRPRSRFGAGCFTEEKAKELRKKTTETSTFHDIMYHSAIASRLASQGQQHHRCVEKSVYVVTRYLLAFLSGAKRKVKANSNRFEEPASSNPNLCPSFIHLRIMGWASLHLQSPDP 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00179 180 MobiDBLite consensus disorder prediction 13 34 - -
Cca11g00179 180 PANTHER OS01G0175100 PROTEIN 1 113 - -
Cca11g00179 180 PANTHER BNAA05G35680D PROTEIN 1 113 - -
Cca11g00179 180 MobiDBLite consensus disorder prediction 46 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00179 Cca-Chr11 2176078 2177121 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00179 - - gmx:100776958 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00179 11 2176078 2177121 Cca11g00179 11 2176078 2177121 ECH