Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00176 ATGGCGACATCCTTGTCAAACATGTTCTTGAAGGGAATCGCAAATCGTTCTCTCAGCAGGCCCTTAAATGGGTTGTTTTATTGCACGAGATATTCCACTAGTATGTCAAATGATTCGGACACGCATGATGACTTCAAGCCAGCTAATAAGCTTGATGGTTCCGGCATTTCTTTGACAAATGTTATTGAGCAGGATGTCAAGGATAATCCTGTCATGATTTACATGAAAGGTGTGCCTGATTTTCCACAATGTGGTTTTAGTTCGCTTGCCGTTAGAGTTTTAAAACACTATGATGTTCCAATAAGTGCTAGAAACATTTTGGAAGATGTTGAACTGAAAAATGCTGTAAAAGCCTTCAGTAACTGGCCAACATTTCCTCAAGTTTTCATTAAGGGAGAGTTTATTGGTGGATCAGATATTGTTCTCAATATGCACCAGACTGGTGAATTGAAGGAAAAGCTTAAAGATGTTACTTCCAAGCAGTAA 486 0.3889 MATSLSNMFLKGIANRSLSRPLNGLFYCTRYSTSMSNDSDTHDDFKPANKLDGSGISLTNVIEQDVKDNPVMIYMKGVPDFPQCGFSSLAVRVLKHYDVPISARNILEDVELKNAVKAFSNWPTFPQVFIKGEFIGGSDIVLNMHQTGELKEKLKDVTSKQ 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00176 161 PANTHER MONOTHIOL GLUTAREDOXIN-S15, MITOCHONDRIAL 1 157 - -
Cca11g00176 161 SUPERFAMILY Thioredoxin-like 58 157 IPR036249 -
Cca11g00176 161 ProSiteProfiles Glutaredoxin domain profile. 59 161 - -
Cca11g00176 161 TIGRFAM TIGR00365: monothiol glutaredoxin, Grx4 family 60 155 IPR004480 -
Cca11g00176 161 Pfam Glutaredoxin 71 135 IPR002109 -
Cca11g00176 161 Gene3D Glutaredoxin 61 161 - -
Cca11g00176 161 CDD GRX_PICOT_like 62 151 IPR033658 -
Cca11g00176 161 PANTHER GLUTAREDOXIN FAMILY MEMBER 1 157 IPR004480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00176 Cca-Chr11 2129895 2132346 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00176 - - gmx:100527610 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00176 11 2129895 2132346 Cca11g00176 11 2129895 2132346 ECH