Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00175 ATGGAGAAGGACGAATTGAAGAAACATGTCCTCACTGCTTTCACTCCTAATGGGGACTATGTTGCTATTCTGTCTGCCAATGGGATTGCTAAAATTTGGAACACAAACACTGGACATTTGTTAGCAGAGTGGAAGCCATCAGATGAAGATCATGATATTCGTTATTCTTGTATTGCATGTAGTTTCATTGGGAAAAAGCGTAGAAAAGAACAACGAACTTTGTTATTAGCTCTGGGTTCAATTGATGGAAGCGTTCTGGCTGTTGATGTTTCTACTGGTGAGAGAAAGTTGACTACTAGCCATCCCGGGGGTATTGGCGGACTTTCATTTGCAAATAAAGGATGTCTTCTTCGCATTGTTGGGCATAGTGGGATGGCATATGAGGTTAATACTCAAACAGGAGATGTTTTAAAGGAATTTAAAATCTCAAAAAAGTCCATCACTTCTCTGGCTTTCTCACATGATGAAAAATATTTAGCTATTGTCAGCTCTAAACTACGGGTTATAAACTGGGAAATTGGGAAAGAGGTTCTGAAGTCCCCTAATGATTTGGTAAATGTACAGCACATTTCTATATCCAATGATGCCAAAAATTTAGTTACAGCAGATTTTGAGGGTAAACTTCTTCAAGTTTGGAAGTGTGATAATTCAGGAAATGTGAGTAGAGGTCCAACACTTCCCATAAGGCATCCTCCATTAGTTTTGGACTGCCACTGTGGTTGCAATAATGAAGAAGATTTAGTTGTTTTGGCAGTTACCGGTAGAGGTTCTGCTTATATATGGAATTTGAATGCCTCCTCCGAAGATCAGATACAGCCAATTGAAACAGATAAGGAAAATGATGAAAATTCAAAAGAAAGGCACACTTCGATTATTGCATCCAGATTACAAGCTGTAGAGGAAGACAAACAGATGAAAGCTCTTGTGGCTCATGGCTCTGTAGATCATCCACAGTTTAGTGTCTTAAATATAAGCAATTCAGGGGAGAATATAGTATTAATTGTAGGAGATGAGATGGATTCTGTTCAGCGGCATGACAGCCCTTCTGACAAAGCAATAACGATGGAAAGCAAGAAAACTAAAAAAAGACAAGCAGCATCTGATCCTGATCTTCCAACCACAACTGACGAGGTTGATTTAGcatttaatgtagatcaaccagaggctgctgaAGGTGTCCTTCTCGATGATGATTTGAATGAGCCAACAATGGGAGAGAAACTTGCTAGTCTAAGTTTGCTGGAAGAGGACAAATCCAGGAGTGATAAAGAGCAAGTATCTTCTCTCTCAGCAAACCCTCCAAGTGCAGACTCTGTACATGTTTTGCTTAAGCAAGCATTAAATGCTGATGATCGCACCCTTCTGCTACATTGCCTGTATACGCAAGATGAGAAGGTTATTAGAAAGTCAATTGCACAGTTGAACCCATCAAACGTCCTCAAACTTCTACACTCTCTTATATCCATTATTGAATCTAGGGGTGCAATTTTGTCGTGTGCTCTTCCATGGTTGAAGTGTCTACTTCTACAGCATGCAAGTGGAATAATGTCCCAGGAATCTTCATTTAAAGCTTTGAACACTTTGTATCAACTAATTGAGTCTAGAGTCTCCACTTTTAAATCTGCCATCCAACTCTCGAGTTGCTTAGACATCCTATACACAGGGGTTATAGACGAGGAAGATGAAGATGATATAGGACCAGTTATCTTTGAGGATAAGGAAAGTGATGAAGAATCTGAGGATGCCATGGAAACTGACCAAAATAACACAGATGAAGAACAATCAGAAGCAGTATTGGATCATGTCAGTGACATAGATGCAAGTGATGATATGATGGGAGATTAA 1845 0.3886 MEKDELKKHVLTAFTPNGDYVAILSANGIAKIWNTNTGHLLAEWKPSDEDHDIRYSCIACSFIGKKRRKEQRTLLLALGSIDGSVLAVDVSTGERKLTTSHPGGIGGLSFANKGCLLRIVGHSGMAYEVNTQTGDVLKEFKISKKSITSLAFSHDEKYLAIVSSKLRVINWEIGKEVLKSPNDLVNVQHISISNDAKNLVTADFEGKLLQVWKCDNSGNVSRGPTLPIRHPPLVLDCHCGCNNEEDLVVLAVTGRGSAYIWNLNASSEDQIQPIETDKENDENSKERHTSIIASRLQAVEEDKQMKALVAHGSVDHPQFSVLNISNSGENIVLIVGDEMDSVQRHDSPSDKAITMESKKTKKRQAASDPDLPTTTDEVDLAFNVDQPEAAEGVLLDDDLNEPTMGEKLASLSLLEEDKSRSDKEQVSSLSANPPSADSVHVLLKQALNADDRTLLLHCLYTQDEKVIRKSIAQLNPSNVLKLLHSLISIIESRGAILSCALPWLKCLLLQHASGIMSQESSFKALNTLYQLIESRVSTFKSAIQLSSCLDILYTGVIDEEDEDDIGPVIFEDKESDEESEDAMETDQNNTDEEQSEAVLDHVSDIDASDDMMGD 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00175 614 MobiDBLite consensus disorder prediction 564 614 - -
Cca11g00175 614 MobiDBLite consensus disorder prediction 564 593 - -
Cca11g00175 614 PANTHER OS01G0649000 PROTEIN 65 611 - -
Cca11g00175 614 MobiDBLite consensus disorder prediction 594 608 - -
Cca11g00175 614 Pfam Dip2/Utp12 Family 451 552 IPR007148 -
Cca11g00175 614 MobiDBLite consensus disorder prediction 341 366 - -
Cca11g00175 614 PANTHER WD REPEAT-CONTAINING 65 611 - -
Cca11g00175 614 Gene3D - 11 307 IPR015943 GO:0005515
Cca11g00175 614 SUPERFAMILY WD40 repeat-like 13 274 IPR036322 GO:0005515
Cca11g00175 614 MobiDBLite consensus disorder prediction 341 375 - -
Cca11g00175 614 MobiDBLite consensus disorder prediction 413 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00175 Cca-Chr11 2122757 2129763 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00175 K14546 - gmx:100796828 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00175 11 2122757 2129763 Cca11g00175 11 2122757 2129763 ECH