Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00171 ATGGCTTCTTCTAAGAAATGGACTACCCTCGTTTGCTCCATCGCTTTTTCAATATATTTCTTTATCATCATTTTTCAAGTTCCCATTTTCAGTATTCCATGTAGAATTGGAATGTGTAAAACACCATTAGAAGTGACATCTTCTCAGTTAATTGCAAGTGAGGTCTTCCCTCTTTTTATAGTGAAGACTCTTCTCTACCCTGGAGCTCTAGCGAAAGCAATTTGCAAGCAGAAAACTCTCCCAAGCTATGGAAATCTGCTAAAGTTGTACCAGTTCAATAAAAGGGCGGTCTCTGCTTCAACAGATCTCCAACGCCTAGAGGTTCTGGCAGGAAGCTACTTGTCTGTGGGAGGAGCAATCACAGGTGTGATAAGACCAGGGAGAATGAGCTTTTTTGGAATCATTCTTCTTATGTGGGGTCTAATTAGAGAGTCCATTATGGGAAAATCTGCTTTCACTTATGCAAAAGGTATCCATATCTATCCCGCCATGTATGTAGCGCTAATCTCAGCATTCTTCTCTATTAGAAAGGATGTTAGAAAGATAATTCGTAGCTTCACTCGAAAGCACGTTGTGAAGGTAAAACGTTTCAAATCAAAGGTAAAATGA 609 0.3974 MASSKKWTTLVCSIAFSIYFFIIIFQVPIFSIPCRIGMCKTPLEVTSSQLIASEVFPLFIVKTLLYPGALAKAICKQKTLPSYGNLLKLYQFNKRAVSASTDLQRLEVLAGSYLSVGGAITGVIRPGRMSFFGIILLMWGLIRESIMGKSAFTYAKGIHIYPAMYVALISAFFSIRKDVRKIIRSFTRKHVVKVKRFKSKVK 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00171 202 PANTHER TRANSMEMBRANE PROTEIN 1 198 - -
Cca11g00171 202 PANTHER TAIL FIBER 1 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00171 Cca-Chr11 2077069 2079074 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00171 - - gmx:100791706 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00171 11 2077069 2079074 Cca11g00171 11 2077069 2079074 ECH