Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00165 ATGCGAAGAGATTTCTGTGATGGTGTGGGCATCGCTCGTCTGTTAAATGCAACCCTCGTCCTACCAAAGTTTGAAGTGGCTTCATATTGGAATGAATCAAGTGGTTTTGCAGATGTATATGATGTAGACTACTTTATACAACATATGAATGGCTTTGTCAAAATTGTCAAAGAGTTACCACCAGAGATTGCATCAAAAGAACCCGTTCGAGTGGACTGTAGCAAACGGAAAGGGCAATTTGATTATGTTGAAAGTGTGCTTCCATCTTTGTTAAAACACAAGTACATTTCAATCACACCAGCAATGTCCCAAAGAAGAGACAGATACCCTTTGTACGCAAAAGCTGCTCTCTGTCAAGCTTGCTACAAGGCGTTACGTCTCACCAGATCCTTGGAAATGAAAGCCTCTCAGCTCCTAGATGCAATACCTAAACCCTTTATGTCTCTCCATCTTCGTTTTGAACCCGACATGGTTGCATACAGCCAGTGTGAGTACCCTGGCCTTTCTCCTGCTTCCATCAAAGCCATAGAAGCAGCCCAAGTGGACAGAAAACCATGGACTGGAGAGTTGGCCCGCGTTTGGAGACGACGAGGAAAATGTCCACTCACACCTAATGAGACAGCTTTAATACTTCAATCGCTTTCCATCCCACCAACCACAAATATATACCTTGCAGCTGGAGATGGTTTGATGGAAATTGAAGGGTTGACAGATACATTTGCTAACATAGTTACCAAGTCAAGTCTTCTCAGTGGGGAAGATTTCACAAGCATGCATGGAAATACAAAAGCTGCTTTGGATTATTATGTATCTATTAACAGTGATTCGTATATAGCCACATATTTTGGGAACATGGATAAAATGGTTGCAGCAATGAGGGCTTTCAAAGGTTTATATAAGACTCTGTTTTTAAGCAGAAGAGGTTTCGCTGAATTAACCTCACAGGGTCTTAGGGGAAAGGAGTTGGTGCAAGCACTATGGAAGGTTCACAGAGATGATTTTGCCATGGGAAGAGGTTCTGCCCTGCCTGAATGTTTTTGCGAATTCAAGTTGTGA 1056 0.4252 MRRDFCDGVGIARLLNATLVLPKFEVASYWNESSGFADVYDVDYFIQHMNGFVKIVKELPPEIASKEPVRVDCSKRKGQFDYVESVLPSLLKHKYISITPAMSQRRDRYPLYAKAALCQACYKALRLTRSLEMKASQLLDAIPKPFMSLHLRFEPDMVAYSQCEYPGLSPASIKAIEAAQVDRKPWTGELARVWRRRGKCPLTPNETALILQSLSIPPTTNIYLAAGDGLMEIEGLTDTFANIVTKSSLLSGEDFTSMHGNTKAALDYYVSINSDSYIATYFGNMDKMVAAMRAFKGLYKTLFLSRRGFAELTSQGLRGKELVQALWKVHRDDFAMGRGSALPECFCEFKL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00165 351 PIRSF UCP009360 1 350 IPR024709 -
Cca11g00165 351 PANTHER OS02G0726500 PROTEIN-RELATED 1 350 - -
Cca11g00165 351 PANTHER O-FUCOSYLTRANSFERASE 13 1 350 - -
Cca11g00165 351 CDD O-FucT_plant 1 301 IPR024709 -
Cca11g00165 351 Pfam GDP-fucose protein O-fucosyltransferase 1 295 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00165 Cca-Chr11 2006521 2009482 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00165 1 312 Miscellaneous Gene Families AT5G01100 34.161 1.77e-50 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00165 - - gmx:100801207 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00165 11 2006521 2009482 Cca11g00165 11 2006521 2009482 ECH