Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00163 ATGATCCTTGCGGTGCTGTTTGCCAACGCTGAGGGCAATATCCTCATCGAACGTTTTCATGGAGTTCCTGCAGAGGAGCGCCTACACTGGCGTTCTTTCTTAGTCAAGCTTGGAGCTGATAATCTTAAGGGTGTCAAAAACGAAGAGCTCCTAGTTGCTTGCCACAAGTCAGTTTATATTGTATACACGGTGCTTGGGGATGTCAGCATCTATGTCGTGGGCAAGGACGAGTACGATGAACTTGCTTTGTCAGAAGTGATCTTTGTGTTAACCTCGGCTGTGAAGGATGTATGTGGGAAGCCCCCAAGTGAGCGCCTTTTCCTTGACAAGTATGGAAGAATATGCTTGTGTTTAGATGAAATTGTATGGCAGGGATATTTGGAAAACACAGAAAAGGATAGAATCAAAAGACTGATAAGGTTAAAGCCTCCAACAGAGTTTTGA 444 0.4459 MILAVLFANAEGNILIERFHGVPAEERLHWRSFLVKLGADNLKGVKNEELLVACHKSVYIVYTVLGDVSIYVVGKDEYDELALSEVIFVLTSAVKDVCGKPPSERLFLDKYGRICLCLDEIVWQGYLENTEKDRIKRLIRLKPPTEF 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00163 147 Gene3D - 1 142 - -
Cca11g00163 147 PANTHER - 3 147 - -
Cca11g00163 147 PANTHER ZETA-COAT PROTEIN 3 147 IPR039652 GO:0006890|GO:0030126
Cca11g00163 147 SUPERFAMILY SNARE-like 1 143 IPR011012 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00163 Cca-Chr11 1985824 1988734 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00163 - - gmx:100305755 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00163 11 1985824 1988734 Cca11g00163 11 1985824 1988734 ECH