Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00151 ATGAACATGAACAAGATGAGTGGTCTTGGTGGAGTGGTGGCAATTTTAATGCTTTTACACTACGCAGAGGCACAGAGAGTGCACCAAGTTGGAGATAGCCAGGGTTGGAGAGTTCCACAAGATACCACCACATACCAAAATTGGGCTTCTAACCAGAATTTCACTGTTGGAGACATTCTAGCTTTTGATTTCCAGACAGGGCGGCATAATGTAATTGAAGTGTCCCGAGATTCGTACAGTTCGTGCAATTCAAATAATCCAATAGGTTCAACATGGAACACGGGCCCTAGTAACATTACCCTAAATAGAGGTGGTGAACATTACTACATTTGTGGCGTTGGTCAGCACTGTGCCAATGGACAAAGGTTAGCCATCAATGTCTCAGGCTCTGCCTTGCCACCTTCCACCGCTATTCCGCCGTcttccaccaccactccactatcaccttcctcttctgcgtccacttcttttccaactttcattcacttcctcttcTTCTCTGCGTTAGTCATTGTGGCGTTTTAG 525 0.3924 MNMNKMSGLGGVVAILMLLHYAEAQRVHQVGDSQGWRVPQDTTTYQNWASNQNFTVGDILAFDFQTGRHNVIEVSRDSYSSCNSNNPIGSTWNTGPSNITLNRGGEHYYICGVGQHCANGQRLAINVSGSALPPSTAIPPSSTTTPLSPSSSASTSFPTFIHFLFFSALVIVAF 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00151 174 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
Cca11g00151 174 MobiDBLite consensus disorder prediction 135 154 - -
Cca11g00151 174 PANTHER BLUE COPPER PROTEIN 12 158 IPR039391 GO:0009055
Cca11g00151 174 Gene3D - 26 138 IPR008972 -
Cca11g00151 174 PANTHER UMECYANIN-LIKE 12 158 - -
Cca11g00151 174 ProSiteProfiles Phytocyanin domain profile. 26 129 IPR003245 GO:0009055
Cca11g00151 174 SUPERFAMILY Cupredoxins 27 128 IPR008972 -
Cca11g00151 174 CDD Stellacyanin 28 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00151 Cca-Chr11 1884810 1885815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00151 28 143 Miscellaneous Gene Families AT5G20230 42.623 1.25e-26 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00151 - - gmx:100305545 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00151 11 1884810 1885815 Cca11g00151 11 1884810 1885815 ECH