Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00147 ATGGCTCTCATCACCTCCCAACCCAAAAACCTCATTCTCCACCGCCCAATTCCACGGTTGGCCACCACCGTTCTTGGCCTTGGGTCCTTCTCTCACAATGTCTTGCCCATTAAAAATTCAAACTTTGACCCAAAGACAAGCAAAATTTCCCTTAAAAACCACCCCTTTACCTATAATTTGGCAGTGATGGCCAAAGCCCAACCCAATGCTGCATTTGGAGAAGGCTTTGAGGCAGAAAAAGGGGAATCGAAACACAGAAAGATTTTGTTGTCTGAGGTTGAGGTGAAGAGAGAGAGGAGAGTTTTCTTTGGGAGGAAATGGAACACTTTGGGTGTTGTCACTGCTGGAATTGTATTAGCCATGCATGTTCTTTCTCTCTTTGCTCCATTTCATTTCAATTGGCCTGCTTTTTGTGTGGCTCTGGCTCTCTATGTTGTCACTGGCCTTTTTGGCATCACTCTTTCTTTCCATAGGAACCTTTCTCATAGGAGTTTCAAGCTTCCCAAATGGCTTGAATATTTATTTGCCTATTGTGGAGTTCTGGCTCTTCAGGGGAACCCAATTGATTGGGTGAGCACACATAGGTACCATCACCAGTTTTGTGATTCTGAGAGAGACCCTCATAGCCCCACTGAAGGATTCTGGTTCAGCCATATGGGTTGGCTCTTTGATACCAATTCTGTCATAGAAAGGTGTGGAGAGCCAAATAATGTTGGTGATTTAGAGAAACAATCCTTCTATAGGTTTCTCAGAAGCACTTATATTGTCCACCCTTTTGCTTTGGGAGCCCTTCTATATGCCACAGGAGGATTTCCTTTTATTGTTTGGGGAATGGGAGTGAGGATTGTTTGGGTTTATCACATAACATGGTTTGTAAATTCAGCTTGCCATGTGTGGGGGAACCAGGCTTGGAACACCAAGGACTTGTCCAGAAATAATTGGTGGGTGGCGTTGCTTGCATTTGGTGAGGGTTGGCACAATAACCACCATGCTTTTGAGTTCTCAGCTAGACATGGACTAGAGTGGTGGCAACTAGACATGACTTGGTACGTTGTCAGATTTCTCCAAGCCATTGGGTTGGCCACTGATGTCAAGTTACCCACAGAAACTCAGAAGCAGAGAATGGCATTGAATAGTGACATAATAGCCACATGA 1155 0.4459 MALITSQPKNLILHRPIPRLATTVLGLGSFSHNVLPIKNSNFDPKTSKISLKNHPFTYNLAVMAKAQPNAAFGEGFEAEKGESKHRKILLSEVEVKRERRVFFGRKWNTLGVVTAGIVLAMHVLSLFAPFHFNWPAFCVALALYVVTGLFGITLSFHRNLSHRSFKLPKWLEYLFAYCGVLALQGNPIDWVSTHRYHHQFCDSERDPHSPTEGFWFSHMGWLFDTNSVIERCGEPNNVGDLEKQSFYRFLRSTYIVHPFALGALLYATGGFPFIVWGMGVRIVWVYHITWFVNSACHVWGNQAWNTKDLSRNNWWVALLAFGEGWHNNHHAFEFSARHGLEWWQLDMTWYVVRFLQAIGLATDVKLPTETQKQRMALNSDIIAT 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00147 384 PANTHER ACYL-COA DESATURASE 71 379 IPR015876 GO:0016717
Cca11g00147 384 CDD Delta9-FADS-like 134 365 IPR015876 GO:0016717
Cca11g00147 384 Pfam Fatty acid desaturase 134 353 IPR005804 GO:0006629
Cca11g00147 384 PRINTS Fatty acid desaturase family 1 signature 157 177 IPR015876 GO:0016717
Cca11g00147 384 PRINTS Fatty acid desaturase family 1 signature 194 223 IPR015876 GO:0016717
Cca11g00147 384 PRINTS Fatty acid desaturase family 1 signature 279 300 IPR015876 GO:0016717
Cca11g00147 384 PRINTS Fatty acid desaturase family 1 signature 322 336 IPR015876 GO:0016717
Cca11g00147 384 PANTHER BNAC05G37460D PROTEIN 71 379 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00147 1 380 Lipid Metabolism Gene Families AT3G15850 64.935 6.35e-180 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00147 K20416 - gmx:100786391 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00147 11 1826390 1828063 Cca11g00147 11 1826390 1828063 ECH