Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00138 ATGGTCTTTTCTGTTATGTTCTCTCCCTCTCTCAACCTTGCCATTTCTTCCACCACATACTGTTGCAGAAAAAGAAGAACATCATCAACCACAAGCAGAGTTACAGTGAGAGCTAGCTCCACAGAGAAGGGTGAATCCAAAGACAAAGATGCCCCAGAATTCAACCCTTTTGGGTTTGTCACTGACAACCCTTCTAGCCGCAGTGCTATTCAATTACCTGAAAGCCCTGCTGAGGATGGCAACGTTGGCCAAATGCTATATAGGATAGAAGACAAGGGCAAGGAATACGGGTCATACGTTAAATCTGGCAAGTTAAGATGGTTTGTGAGAGAAACAGGATCAGCAGATAGCAGAAGAGGAACAATTGTGTTTCTTCATGGGGCCCCAACGCAATCTTTTAGTTACCGAGTTGTTATGTCTCAGTTGTCGGATGCGGGGTTCCATTGCTTTGCACCAGACTGGATAGGATTTGGTTTCAGTGATAAACCACAGCCAGGATATGGTTTTAATTACACAGAAAAGGAGTTCCATGATGCATTGGATAAACTGCTTGAGGTGTTGGGGGTCAAATCTCCCTTTTTCCTTGTTGTTCAGGGATTTCTTGTAGGTTCATATGGACTAACTTGGGCCCTGAAGAACTCAAGCAAGATATCAAAGCTAGCAATACTAAACAGTCCATTAACTGATTCATCTCTCATTCCTGGACTTTTTCAGAAGCTCAGAATTCCTCTGTATGGTGAATTTACATGCCAGAATGCTATTATTGCTGAGCGGTTTATTGAAGGAGGTAGCCCTTACGTTCTGAAAAATGAAAAAGCTGACGTGTACCGGTTACCTTATTTGTCAAGCGGTGGACCTGGATTTGCTCTACTTGAAGCTGCAAGAAAAGCAAACTTCAAAGGTACTTTCAGTGAAATAGCAGAAGGATTTGCAACTCAGAGATGGGATAAACCAATACTACTTGCTTGGGGATTATCAGACAAGTACTTGCCCCAGTCTGTGGCAGAGCAGTTTCAGAAAGGAAATCCAGCACACATCCAGCTTAAATTGATTGAAGGAGCAGGTCACATGCCACAAGAGGACTGGCCTGAGAAAGTTGTTGATGCTTTGAGAATGTTCTTCTGA 1125 0.432 MVFSVMFSPSLNLAISSTTYCCRKRRTSSTTSRVTVRASSTEKGESKDKDAPEFNPFGFVTDNPSSRSAIQLPESPAEDGNVGQMLYRIEDKGKEYGSYVKSGKLRWFVRETGSADSRRGTIVFLHGAPTQSFSYRVVMSQLSDAGFHCFAPDWIGFGFSDKPQPGYGFNYTEKEFHDALDKLLEVLGVKSPFFLVVQGFLVGSYGLTWALKNSSKISKLAILNSPLTDSSLIPGLFQKLRIPLYGEFTCQNAIIAERFIEGGSPYVLKNEKADVYRLPYLSSGGPGFALLEAARKANFKGTFSEIAEGFATQRWDKPILLAWGLSDKYLPQSVAEQFQKGNPAHIQLKLIEGAGHMPQEDWPEKVVDALRMFF 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00138 374 PRINTS Alpha/beta hydrolase fold signature 146 161 IPR000073 -
Cca11g00138 374 PRINTS Alpha/beta hydrolase fold signature 210 223 IPR000073 -
Cca11g00138 374 PRINTS Alpha/beta hydrolase fold signature 319 333 IPR000073 -
Cca11g00138 374 SUPERFAMILY alpha/beta-Hydrolases 98 373 IPR029058 -
Cca11g00138 374 PRINTS Epoxide hydrolase signature 126 144 IPR000639 GO:0003824
Cca11g00138 374 PRINTS Epoxide hydrolase signature 146 161 IPR000639 GO:0003824
Cca11g00138 374 PRINTS Epoxide hydrolase signature 351 373 IPR000639 GO:0003824
Cca11g00138 374 MobiDBLite consensus disorder prediction 31 56 - -
Cca11g00138 374 Pfam Alpha/beta hydrolase family 122 369 IPR000073 -
Cca11g00138 374 Gene3D alpha/beta hydrolase 93 374 IPR029058 -
Cca11g00138 374 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 91 374 - -
Cca11g00138 374 PANTHER HYDROLASE ALPHA/BETA FOLD FAMILY 91 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00138 Cca-Chr11 1709805 1715857 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00138 - - gmx:100807417 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00138 11 1709805 1715857 Cca11g00138 11 1709805 1715857 ECH