Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00136 ATGGCTGCTACTTCCAACACCACCTACGGAGCCGACCCGACAACGCCCAACACCACCTTCGTCCAAGCCGACCCTTCCAACTTCCGCGCAGTCGTCCAGAAGCTGACGGGCGCCTCCGACCACCCCTCCGCCCAGAAGCTCCCCCTGACCCTCCCCTCCCGCATGGCCCACTCCCAGAGGGCCGACCAGGTGGGCCCCAAAAAGCCCAACTTCAAGCTCCAGGAGAGGCGCGGGAAGAAGCTGGAGCTGAGCGTGGGCGTGGCGGAGAGAATGATGATGGTGATGGCCTCGCCTGTTTCCCCACTGGAGATGTTGGCGCGTGGGAGTGGGAGTGGGAGCCCACGCACCCCCCACGAGGAGGAAGAGGAGAGAGCCATAGCCGAGAAAGGGTTCTACTTGCACCCTtctcctctctccactcccagatcccctcagcttctccctcttttccctctccattctcccactcACACCAACAACAACCATTCTTGA 492 0.5488 MAATSNTTYGADPTTPNTTFVQADPSNFRAVVQKLTGASDHPSAQKLPLTLPSRMAHSQRADQVGPKKPNFKLQERRGKKLELSVGVAERMMMVMASPVSPLEMLARGSGSGSPRTPHEEEEERAIAEKGFYLHPSPLSTPRSPQLLPLFPLHSPTHTNNNHS 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00136 163 MobiDBLite consensus disorder prediction 104 163 - -
Cca11g00136 163 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 10 160 IPR039611 -
Cca11g00136 163 MobiDBLite consensus disorder prediction 114 129 - -
Cca11g00136 163 MobiDBLite consensus disorder prediction 1 22 - -
Cca11g00136 163 Pfam VQ motif 15 42 IPR008889 -
Cca11g00136 163 PANTHER VQ MOTIF-CONTAINING PROTEIN 11 10 160 - -
Cca11g00136 163 MobiDBLite consensus disorder prediction 55 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00136 Cca-Chr11 1664874 1665873 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00136 - - ccaj:109817387 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00136 11 1664874 1665873 Cca11g00136 11 1664874 1665873 ECH