Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca11g00128 | ATGGATTGGTTCTCCTGGCTCTCCAAAACAGGTCTTGAGCCAACCTTAGTGTACGAGTATGGCCTCACTTTTGCTCACAACGAGCTTGAAGAAGAAGACATAATATACTTCAACCACGAGTTTCTGATGAGCATGGGAATCTCCATAGCGAAGCACAGGCTAGAGATTCTGAAGCTTGCAAGGAAAGTGAAGGGAAAGAGGCCACCACCACGCCCTGTGGCAAGGCTCATGGTGGCGATCAAGAGGACAAAGAGGTGTTTGGCTAATTACATCCGCACGTTCATTGGCTCATGTGAGGAAGAGTCATCAGCACTTGTTGTGGTGCCATCATCAAGGACAAGGCCTAGTAGATGGAAGAGTAGTCATGTGATGAAGAGGAACAAGAAAAAGTTGGTGGTGGCTAAGCAAGAGAGGCTATTGCTCACAAATGGAAGTCCTACTGTGGTGCCTGCTCTTGATGCTTTCACTAGTCCTAATCCTATGGTTTACCATTTCCAAAAGGAAGTTGAtgatgatgatgttgatgttgatgttgatgttgatgatgatgATGGGTACTGGTCATCAGCTGCTACTGAAGAAATCAGGTGGGATACCATGTTCCAGGATCTCAAGCCAAATTGA | 624 | 0.4359 | MDWFSWLSKTGLEPTLVYEYGLTFAHNELEEEDIIYFNHEFLMSMGISIAKHRLEILKLARKVKGKRPPPRPVARLMVAIKRTKRCLANYIRTFIGSCEEESSALVVVPSSRTRPSRWKSSHVMKRNKKKLVVAKQERLLLTNGSPTVVPALDAFTSPNPMVYHFQKEVDDDDVDVDVDVDDDDGYWSSAATEEIRWDTMFQDLKPN | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca11g00128 | 207 | Gene3D | - | 1 | 68 | IPR013761 | - | |
| Cca11g00128 | 207 | CDD | SAM_superfamily | 2 | 62 | - | - | |
| Cca11g00128 | 207 | PANTHER | OSJNBA0033G05.11 PROTEIN | 1 | 207 | - | - | |
| Cca11g00128 | 207 | PANTHER | OSJNBA0033G05.11 PROTEIN | 1 | 207 | - | - | |
| Cca11g00128 | 207 | SUPERFAMILY | SAM/Pointed domain | 5 | 69 | IPR013761 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca11g00128 | Cca-Chr11 | 1541866 | 1543041 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca11g00128 | - | - | pvu:PHAVU_010G157800g | 308.916 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Cca11g00128 | 11 | 1541866 | 1543041 | Cca11g00128 | 11 | 1541866 | 1543041 | ECH |