Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00123 ATGTCTTCTTTGAAATCAGTTATGTCTCTTTACTCTAAGTCCAACTTTGATGAGCTTCAATGGGTCATCCAAATCCGTAGAACCCTTGAAGAAGAGGTTGATGAAGATGGTGAATTCCCTGTATCCATCTTCAGCGTTCCGAAGCTCCTCATGGTTTGTGATCAAGATTCTTATATTCCTCAGCATGTTGCACTTGGTCCTTACCATTATTGGCGTCCAGAACTGTATGAGATGCAGAGATACAAGCTTGCAGCAGCAAAAAGGTTCCAGAAACAGTTACAAAGCCTCAAGTTGGATAATCTTGTTGACCAGTTGACCATGTTGGAGCAAAGGGTTCGAGCATGCTACCACAAGTTCTTGGATTTCAACGGGGAAACATTGGTGTGGATGATGGCAATTGATGCCTCATTCTTGGTTGAGTTTCTCCAAGTTTTTGTGCCATGCAAGATGGAACAAAATTACCATGTATCTCATGATGCAATTTTGAGGGATGTTGTAATGCTTGAGAATCAAATCCCATTATTTGTGTTGAGAAAGATGCTTGAGTTCAAATTCTCATCACTAGAAGCTACTGATGAGATCCTGATCTTGAAGTTCATAAGCCTATTCAAAGAGATTTCTCCTTTCAAGATGGTGGAGGAGGAATATCCACACAATATTCAAGTCTCCAAGAGTGCACATCTTCTAGATTTCCTGTATCACATGATTGTACCTAATGTATTAGAACAAGAGCAAGGTACAATTGATCAAGTTGAGTTTCAACAAGAAAAGGAAGAAGGAAATGAAAAACCAAGTGGTGACTCAAGCCAAGTTAAACAACTCTATAGTGAACTATGGAAGCAGCTTTCAAAACTAAACAAAGGGCCTGTGAAAATAATGAAAAAGGTAATTGCATCTAAACCCATGAAAGTCTTTGTTAAGCTACCATGGAAAATCATAACCAAACTTCCAGGGGCTAAAATTCTTAAACAACCTCTTGAATACTTATTCTTCTCTCAAAATGAAGGAGAAAGTATGAGTTCAAGCTTGAATATGAACAAACCACCCTTGGTGGAAGAAATCACTATTCCTTCAGTTTCAGAACTCTTGAATTGTGGTGTTAATTTCTTACCAACCAAGGGAAGCATATCAAACATTAGCTTTGATGTGAAAACATGCACGTTGTACCTTCCCACAATTGGTTTGGACGATAACACTAAAGTTTTCCTGAAAAATTTGGTTGCATATGAAGCTTCAGTTGCATGGGGGCCATTGGTTATAACCCGTTACACTGAGTTGATGAACGGGATTATAGACTCGGAGGAAGATGCAAAGATTCTGAGGGGAAAAGGGATCATTGTGAACCACTTGAAGAGTGATGAAGAAGTGGCTAACATGTGGAATGGGATGAGCAAGTCGTTGAGATTGTCGAGGGAACCATTGTTGGATAAGGTGATTGAAGATGTTAACAAGTATTATAACGGAAGAATGAAGGTTAAAGTTATGAAGTTCATGAAGGCTTACGTGTTTGGTTCATGGCAGATTTTGACGTTCCTAGCTACCATATTGCTCTTGCTCTTGATGACCTTGCAAGCTTTCTGCTCTGTCTATACTTGTAAATATACTTTTAGTGACACTTCCGAGTGA 1626 0.3911 MSSLKSVMSLYSKSNFDELQWVIQIRRTLEEEVDEDGEFPVSIFSVPKLLMVCDQDSYIPQHVALGPYHYWRPELYEMQRYKLAAAKRFQKQLQSLKLDNLVDQLTMLEQRVRACYHKFLDFNGETLVWMMAIDASFLVEFLQVFVPCKMEQNYHVSHDAILRDVVMLENQIPLFVLRKMLEFKFSSLEATDEILILKFISLFKEISPFKMVEEEYPHNIQVSKSAHLLDFLYHMIVPNVLEQEQGTIDQVEFQQEKEEGNEKPSGDSSQVKQLYSELWKQLSKLNKGPVKIMKKVIASKPMKVFVKLPWKIITKLPGAKILKQPLEYLFFSQNEGESMSSSLNMNKPPLVEEITIPSVSELLNCGVNFLPTKGSISNISFDVKTCTLYLPTIGLDDNTKVFLKNLVAYEASVAWGPLVITRYTELMNGIIDSEEDAKILRGKGIIVNHLKSDEEVANMWNGMSKSLRLSREPLLDKVIEDVNKYYNGRMKVKVMKFMKAYVFGSWQILTFLATILLLLLMTLQAFCSVYTCKYTFSDTSE 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00123 541 Pfam Plant protein of unknown function 43 520 IPR004158 -
Cca11g00123 541 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 3 532 IPR004158 -
Cca11g00123 541 PANTHER UPF0481 PLANT-LIKE PROTEIN 3 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00123 Cca-Chr11 1456864 1458618 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00123 - - ccaj:109792271 1058.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00123 11 1456864 1458618 Cca11g00123 11 1456864 1458618 ECH