Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00102 ATGATCGGCGCAAAGATTCTTTTCACTGATCCCCCTAAGAAGAACAAGTTTGGGTTTGATTTCCATCTTGTACAGTTTTGTTTTGCCTGCTTGCCTTCCTTGGCTGTATATTTGGTGGCGCAGTATGCTCGTTACGAAATGAGAAAAATGGAGGTGGAAGTGGCGCTAAAAAGgaaggagaaagaagaagaagaagcaaaggaaagagaaaagGCAATGGAACTAAAGCCCCCTGAGGAAAAGGAAGAAAAATCTGATCCCCAGCTTTCAGAGGTGAAAGTGAGACTTGAGAAACTTGAAGAAGTTGTGAAGGAGATTGTGGTTGAAACAAAGAAACAATCTAGCAGCAACCTAGGCAAAAATCAGGTGTCCGATGATGAGAAAATACACCCAAATTCCCCTGCACCAAGGAACACGAGTACCCCTGATTCTGCATCAAATAAAGCTGTAGACGAAGACAGTCTTGATAAGCACAATTCTCTCAAGTCTAAGCCAGAATTACATGAAAAGAGCAAGGGTTCAGTTGCAACTGCAAATTCTTCTCCTCTGGATCCCAAAGGCCAGAATCAAGTGGAGGTGCTTCTTAAGGTACTATGA 597 0.402 MIGAKILFTDPPKKNKFGFDFHLVQFCFACLPSLAVYLVAQYARYEMRKMEVEVALKRKEKEEEEAKEREKAMELKPPEEKEEKSDPQLSEVKVRLEKLEEVVKEIVVETKKQSSSNLGKNQVSDDEKIHPNSPAPRNTSTPDSASNKAVDEDSLDKHNSLKSKPELHEKSKGSVATANSSPLDPKGQNQVEVLLKVL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00102 198 Coils Coil 89 109 - -
Cca11g00102 198 MobiDBLite consensus disorder prediction 173 187 - -
Cca11g00102 198 MobiDBLite consensus disorder prediction 110 190 - -
Cca11g00102 198 PANTHER F23A5.5 3 180 - -
Cca11g00102 198 MobiDBLite consensus disorder prediction 149 171 - -
Cca11g00102 198 MobiDBLite consensus disorder prediction 58 92 - -
Cca11g00102 198 Coils Coil 42 76 - -
Cca11g00102 198 MobiDBLite consensus disorder prediction 133 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00102 Cca-Chr11 1130184 1137215 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00102 - - vra:106773757 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00102 11 1130184 1137215 Cca11g00102 11 1130184 1137215 ECH