Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00100 ATGGCACGCCTCATTCGATCCCTCGCGAAACCCCTAACCCTAACCCTAACTCACCAACACCAACAACTATGTATTTCTCGTTACCTATCCCCAAGAACTTACATATCAGACATGCGCAAATCAGCTTTCGAAGGATACATTTTGAGACTCCTCCGATCTGAGATTCAGTACGAGCTCCAATCCTCTCCTCCCAACAACCCTGTTACCAAATTCAATTCCTTCATGGTGGATGGCCGAGGTGGGGAGCGATGGATTACGTTGAGGAGACAATATGCTGATGAAGATATCAAACTTGAAGCCACCATGTTTGATGGAGCAGTTCCTGCTCCAAGTAAAAATGGCGGTGTGGCTAATTCAGATGAAATGCAAATGCACATTACTGTAATTGTCACCATCTCCAAGGGAGAAGGTGCTGGTGGTGTGTTGGAATTCATGTGCTCTGCTTGGCCTGACAGTATAGAGATTAAAAGGCTGTTCATTCGTACGAATGAGAAGATGATCGCTGAGCCCTATGCCGGTCCTGAATTCACGGAATTGGATGATGGGTTGCAAGACAGCCTTTATGATTTCTTGGAAGTAAGGGGTGTTGGTGATGAACTTGCTGTTTTCTTGCATCAGTATATGAAACAAAAGGATAAAGCGGAGTTGGTGGGATGGATGGAAAGGGTTAAGGCTTTTATTGAAAGGAAATAA 693 0.4473 MARLIRSLAKPLTLTLTHQHQQLCISRYLSPRTYISDMRKSAFEGYILRLLRSEIQYELQSSPPNNPVTKFNSFMVDGRGGERWITLRRQYADEDIKLEATMFDGAVPAPSKNGGVANSDEMQMHITVIVTISKGEGAGGVLEFMCSAWPDSIEIKRLFIRTNEKMIAEPYAGPEFTELDDGLQDSLYDFLEVRGVGDELAVFLHQYMKQKDKAELVGWMERVKAFIERK 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00100 230 Pfam Mitochondrial glycoprotein 51 227 IPR003428 GO:0005759
Cca11g00100 230 SUPERFAMILY Mitochondrial glycoprotein MAM33-like 41 228 IPR036561 -
Cca11g00100 230 PANTHER COMPLEMENT COMPONENT 1 3 228 IPR003428 GO:0005759
Cca11g00100 230 PANTHER MITOCHONDRIAL GLYCOPROTEIN FAMILY PROTEIN 3 228 - -
Cca11g00100 230 Gene3D Mitochondrial glycoprotein 44 227 IPR036561 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00100 Cca-Chr11 1123147 1124762 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00100 - K15414 gmx:100797340 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00100 11 1123147 1124762 Cca11g00100 11 1123147 1124762 ECH