Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00078 ATGGCTGTGGCTATGGCTGTTTGGAGTGTTGGTCTTCACTCCAGTGCTGCTCATAATGGCTTGAGAGCGTTGGAAAAAACCGTTTGCAGTGCCCCTTTTTTGAAGGCCTCATCTGGGTTTGCTGCTACTAAGCCATTCTGCATCCGTAACAAAAGATTGTCATCTTCTGGAACTACAATTATCCCTCGAGCAGCACCAGTTACTGATGTGGAGGATGGAAACCAAGGCGAGACTGATACTACTCCAGTTCCCATAGTTATAATTGACCAAGACTCTGATCCAGATGCAACTGTGGTGGAGATAACTTTTGGTGACAGGCTTGGGGCACTTCTTGACACAATGAATGCATTAAAACACTTAGGTCTCAATGTTGTTAAGGCAAATGTCTTTCTGGATTCATCTGGCAAGCACAACAAGTTTTCCATCACAAAAGCTGACACTGGCAGAAAAGTGGAAGAGCCAGAATTGTTAGAGGCAATTCGATTGACAATTATAAATAATCTGCTTCAATACCATCCAGAATCAAGTTCCAGGTTAGCAATGGGAGCAGCTTTTGGACTTGTGCCTCCAAAAGAGCAGGTTGATGTAGACATAGCAACCCACATAAACATTTCTGATGATGGCCCAGATCGAAGTTTGCTGTATGTGGAGACAGCTGATCGGCCAGGATTACTGGTTGATCTTGTAAAGATTATTACTGACATTGACATTGCTGTTGAATCAGGAGAGTTTGACACTGAGGGGCTCTTGGCTAAGGCAAAGTTTCATGTCAGCTACAAGGGTAAAGCAATCATCAGGCCTCTCCAGCAGGTTCTTGTTAACTGCTTGAGATATTTCTTGAGGCGTCCGACAACTGAAGAATCCAGTTTTTGA 873 0.4387 MAVAMAVWSVGLHSSAAHNGLRALEKTVCSAPFLKASSGFAATKPFCIRNKRLSSSGTTIIPRAAPVTDVEDGNQGETDTTPVPIVIIDQDSDPDATVVEITFGDRLGALLDTMNALKHLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEEPELLEAIRLTIINNLLQYHPESSSRLAMGAAFGLVPPKEQVDVDIATHINISDDGPDRSLLYVETADRPGLLVDLVKIITDIDIAVESGEFDTEGLLAKAKFHVSYKGKAIIRPLQQVLVNCLRYFLRRPTTEESSF 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00078 290 PANTHER FROM 2D-PAGE OF LEAF PROTEIN, PUTATIVE-RELATED 43 290 - -
Cca11g00078 290 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 43 290 IPR040217 -
Cca11g00078 290 ProSiteProfiles ACT domain profile. 98 178 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00078 Cca-Chr11 857012 861474 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00078 - - gmx:100797324 513.072