Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00070 ATGgctgctgctgctgctgcaacttctggggttgttgctgGTAACGGTTCATCTGCTTCTTGGATGAAATTCAAACGAAGGGAAAGGAAGAACAACAAATCAAGGGTttgttgttcttattattcttcttcttcttctGTTATGGATCCTTATAAGACCTTGAGAATACAAAAGGGGGCTTCTGAATCTGAGGTTAGGAAGGCTTTCAGACAGCTTGCTTTGCAGTACCATCCAGATGTGTGCAGAGGTAACAATTGTGGGGTACAGTTTCACGAAATCAACGAGGCTTATGATATTGTGATGGCGAACTTGAGAGGGGAATCAAATGAGGCACAAAGTTATGAGGCATATTATGATGATGGTGGAATTGATGAGCCACTGAGGGGAATGAACGATCCAGATTGGGACATGTGGGAGGAGTGGATGGGGTGGGAAGGAGCAGGAATTCGTGACTATACCTCTCATATTAATCCTTACATTTGA 483 0.3747 MAAAAAATSGVVAGNGSSASWMKFKRRERKNNKSRVCCSYYSSSSSVMDPYKTLRIQKGASESEVRKAFRQLALQYHPDVCRGNNCGVQFHEINEAYDIVMANLRGESNEAQSYEAYYDDGGIDEPLRGMNDPDWDMWEEWMGWEGAGIRDYTSHINPYI 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00070 160 ProSiteProfiles dnaJ domain profile. 49 122 IPR001623 -
Cca11g00070 160 SUPERFAMILY Chaperone J-domain 45 149 IPR036869 -
Cca11g00070 160 Pfam DnaJ domain 49 101 IPR001623 -
Cca11g00070 160 SMART dnaj_3 48 105 IPR001623 -
Cca11g00070 160 PRINTS DnaJ domain signature 51 69 IPR001623 -
Cca11g00070 160 PRINTS DnaJ domain signature 69 84 IPR001623 -
Cca11g00070 160 PRINTS DnaJ domain signature 85 105 IPR001623 -
Cca11g00070 160 Gene3D DnaJ domain 20 108 IPR036869 -
Cca11g00070 160 CDD DnaJ 49 99 IPR001623 -
Cca11g00070 160 PANTHER CO-CHAPERONE PROTEIN DJLA 2 160 - -
Cca11g00070 160 PANTHER HEAT SHOCK PROTEIN BINDING PROTEIN 2 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00070 Cca-Chr11 787260 788734 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00070 - - gmx:100780336 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00070 11 787260 788734 Cca11g00070 11 787260 788734 ECH