Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00033 ATGGAGCGAGCCATTGTACTGTACTTAGAGAGTGTGGCGTTGTTGATATTGTGCAGCACAATCAGTGGTGCACAACAAGAGTTTCAATCTCAATCTCGGCGAGAGGCGAGTTACGTGAAGATGGTGGTGAACGCGACGGAGTTGGCAGCGGAAGACTACTACGACTACATCATCGTGGGAGGGGGCACGGCGGGGTGCCCACTGGCGGCGACACTCTCGCAGAAGTACCGCGTGCTTCTACTGGAACGAGGTGGCCTTGGCCGCGGCAACCCCAACCTGATGAACCAAGAAGGCTTCTTGAGCAACCTCTTAAACACCCACACAACGGACTCTCCGGCTCAGCCTTTCACCTCCGAAGAGGGAGTCCCCAACGCCCGCGGCCGCGTCCTCGGCGGCAGCAGCGCCATCAACGCGGGCTTCTACAGCCGCGCCGACGCCGACTTCTTCAGGCGCTCCGGCCTCCCGTGGAACCTCACCATGGTCAACCAGTCCTACCAGTGGGTCGAGAGCCAAATCGTCTTCCGACCCAACCTCAAGAAGTGGCAATCCGCGTTTCGCGACGGCTTGCTGGAAGCCGGCGTCACTCCCTACAACGGCTTCACTCTGGACCACGCCACCGGCACCAAGATCGGCGGGTCCACCTTCGACGGCGCCGGCAGAAGACACAGCTCGGCGGATCTGTTATCTGGCGGGCGCGCGTCCAACATGAAGGTGGGCGTCCAGGCGAGCGTGGAGAGGCTCCTCCTGGGCGGCGGCGGCGGGATGGGAGTCCTCTTCAGGGACATGAGAGGGATGTACCACGAGGCGTTGGTGCGGGAGCACGGCGAGGTTATCCTCTCGGCCGGCGCAATCGGAAGCCCTCAGCTTCTCTTACTGAGCGGAATCGGTCCCAGGCCTTATCTCTCTTCGTGGGGGATTCCAGTCTCTCACCACCTTCCCTACGTAGGACACTTCCTCTACGATAACCCTAGAAACGGAATCACGATCCTACCCTCGCTCCCTCTGGAGCATTCTCTGATACAAGTGGTGGGAATCACCGACGAAGGGGCTTACATCGAAGCCGCGTCCAACGTGGTTCCCTTCACGTCCCCTCCCCACACTGCTTTCGTCCACTCGCCGCTCCTCCTACTGGCTTCCACGGATATCAACGCCAACCCCGTTGTGAGGTTCAACTACTTCAACAACCCCGTCGACGTGGAGCGGTGCGTCAACGGGACCAGGAAGATAGCCGATATTCTCAAGAGTAGGGCTTTCAAGGATTTCATGTTCAGTAATTGGTTTGGGGAGCGTGACTTCAGATTCATAGGCCCTGCTTTGCCTCTTCACCAAACCGACTACCCTCGCATGGCCGACTTCTGCCGCCGGACCGTCAGCACCATTTGGCACTACCACGGCGGCTGTGTCGTCGGCAGGGTCGTTGATCGGAATCTCCACGTCATCGGCGTTCCTTCACTTCGCATCGTCGATGGATCCGTTTTCAGCGTTTCTCCCGGAACCAATCCTCAGGCCACTCTAATGATGCTAGGACGCTATTTTGGGCTCAAGATAATCAGAGAAAGGGGAGCAGCAGCACACAAATGA 1581 0.5876 MERAIVLYLESVALLILCSTISGAQQEFQSQSRREASYVKMVVNATELAAEDYYDYIIVGGGTAGCPLAATLSQKYRVLLLERGGLGRGNPNLMNQEGFLSNLLNTHTTDSPAQPFTSEEGVPNARGRVLGGSSAINAGFYSRADADFFRRSGLPWNLTMVNQSYQWVESQIVFRPNLKKWQSAFRDGLLEAGVTPYNGFTLDHATGTKIGGSTFDGAGRRHSSADLLSGGRASNMKVGVQASVERLLLGGGGGMGVLFRDMRGMYHEALVREHGEVILSAGAIGSPQLLLLSGIGPRPYLSSWGIPVSHHLPYVGHFLYDNPRNGITILPSLPLEHSLIQVVGITDEGAYIEAASNVVPFTSPPHTAFVHSPLLLLASTDINANPVVRFNYFNNPVDVERCVNGTRKIADILKSRAFKDFMFSNWFGERDFRFIGPALPLHQTDYPRMADFCRRTVSTIWHYHGGCVVGRVVDRNLHVIGVPSLRIVDGSVFSVSPGTNPQATLMMLGRYFGLKIIRERGAAAHK 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00033 526 Pfam GMC oxidoreductase 54 322 IPR000172 GO:0016614|GO:0050660
Cca11g00033 526 PANTHER (R)-MANDELONITRILE LYASE-LIKE 35 521 - -
Cca11g00033 526 Gene3D - 54 509 IPR036188 -
Cca11g00033 526 Gene3D - 174 459 - -
Cca11g00033 526 PANTHER OSJNBA0019K04.7 PROTEIN 35 521 - -
Cca11g00033 526 SUPERFAMILY FAD/NAD(P)-binding domain 39 346 IPR036188 -
Cca11g00033 526 PIRSF Alcohol_oxidase 30 357 IPR012132 GO:0050660
Cca11g00033 526 PIRSF Alcohol_oxidase 370 526 IPR012132 GO:0050660
Cca11g00033 526 Pfam GMC oxidoreductase 377 510 IPR007867 GO:0016614
Cca11g00033 526 SUPERFAMILY FAD-linked reductases, C-terminal domain 319 466 - -
Cca11g00033 526 ProSitePatterns GMC oxidoreductases signature 2. 282 296 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00033 Cca-Chr11 387279 389350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00033 35 522 Miscellaneous Gene Families AT3G56060 43.773 3.86e-135 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00033 K08248 - gmx:100820069 837.025