Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00031 ATGTCACGAGAAATGGTGTACGTGCAACAGTGCATGGGTATCAATGGCCTCGAGAAAATCATTCTTAGAGAAGTTCGCGGCTTCTCTGCAGAGGTTTATCTATATGGTGGCCAAGTTACATCATGGAAGAATGAACTAGGGGAGGAATTGCTCTTTGTCAGTAGTAAGACTAGTTTTAAGCCTCCGAAAGCCATACGTGGAGGTATTCCGATATGCTTTCCACAATTTTCAAATCATGGTTCTCTCGAGAACCATGGATTTGCCAGGAATAGGTTTTGGACCTTAGATCCTAATCCTCCGCCATTTGCAACAACTAGCAACAACAAAGCTTTCATTGATTTGATTCTTAAGAACTCTGAAGAAGAAACAAAAAGTTGGCCCCATAGATATGAGTTTCGCTTGAGGATAGCTTTGGGACCTGCAGGAGATCTGATGTTGACATCTCGCATTCGAAATACAAATACAGATGGAAAATCATTCACCTTCACATTTGCCTATAATACATACTTATATGTTACTGACGTCAGTGAAGTGCGAATTGAAGGATTAGAGACACTAGATTATCTGGACAACTTGAAGAATAAAGAACGATTTACTGAACAAGGAGATGCTATAACATTTGAGTCTGAAGTGGACAAAGTATACTTAAGCACTCCGACAAAAATTGCTATCATAGATCACGAAAGGAAGAGAACCTTTGTATTGAGGAAAGATGGGCTTCCTGATGCAGTGGTATGGAACCCGTGGGACAAGAAATCAAAAAGCATACCTGATTTAGGAGATGCTGATTATAAACATATGCTTTGTGTTCAAGCTGCTTGTGTAGAAAAAGCAATTACTCTTAAACCTGGTGAAGAGTGGAAAGGAAGGCAAGAAATTTCTGCAGTTCCTTCAAGTTATTGTAGTGGTCAACTTGACCCACGGAAAGTACTTTTTAGTTATTAG 945 0.3968 MSREMVYVQQCMGINGLEKIILREVRGFSAEVYLYGGQVTSWKNELGEELLFVSSKTSFKPPKAIRGGIPICFPQFSNHGSLENHGFARNRFWTLDPNPPPFATTSNNKAFIDLILKNSEEETKSWPHRYEFRLRIALGPAGDLMLTSRIRNTNTDGKSFTFTFAYNTYLYVTDVSEVRIEGLETLDYLDNLKNKERFTEQGDAITFESEVDKVYLSTPTKIAIIDHERKRTFVLRKDGLPDAVVWNPWDKKSKSIPDLGDADYKHMLCVQAACVEKAITLKPGEEWKGRQEISAVPSSYCSGQLDPRKVLFSY 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00031 314 CDD D-hex-6-P-epi_like 27 294 IPR025532 -
Cca11g00031 314 Pfam Aldose 1-epimerase 20 293 IPR008183 GO:0005975|GO:0016853
Cca11g00031 314 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 5 310 - -
Cca11g00031 314 Gene3D - 15 300 IPR014718 GO:0030246
Cca11g00031 314 PIRSF PHexose_mutarotase 8 301 IPR025532 -
Cca11g00031 314 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 5 310 - -
Cca11g00031 314 SUPERFAMILY Galactose mutarotase-like 14 293 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00031 Cca-Chr11 355708 359814 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00031 K01792 - gmx:100784457 606.29