Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00028 ATGGCGATGGCGTCATTCGTGGGCGTGGCTTCGCAGAGCTCCCTCTGCACGCGTCTTCTTGCTTTCCACCCATTCCACCACACGCGAACTCCGTCTCCTTCTACCGTCAGCCTCAAATACAAATCTCAAGCTGTGTGTCTCAAGTCCCACTGCAATGGAGCAGCGCCACCTGTCATCGCGTCCACACAAAGCGATATCCTGCGCGGCTCCACTCGCACGGTGACGACGCTGTTGGGAATGGCGGCGTTGTTGCTGAAAGCGATTCCAGTGAGTATGAGTGGCTATAGCAATAGCAATAGCATTTCAACGATGGGTGCGTTGTTCTTCGCTTCTTTGCGGGACCGGCCGAGCGGCGCCCTGAACACGCCGCTGACGGTGGTGGCGGCGGGGCTGGGGAAGTGGCTGGACATATATAGCGGGGTTTTGATGGTTAGGGTTTTGCTGAGTTGGTTCCCAAACATCCCCTGGGAACGCCAGCCTCTCTCCGCAATTCGAGACCTATGCGATCCCTATCTCAACCTCTTCCGTAACATCATTCCCCCCGTTTTCGACACCCTCGACGTTAGTCCTCTTCTCGCTTTCGCCGTCTTAGGCACTCTCGGCTCTATTCTCCAAACTGCTATGTGA 627 0.5614 MAMASFVGVASQSSLCTRLLAFHPFHHTRTPSPSTVSLKYKSQAVCLKSHCNGAAPPVIASTQSDILRGSTRTVTTLLGMAALLLKAIPVSMSGYSNSNSISTMGALFFASLRDRPSGALNTPLTVVAAGLGKWLDIYSGVLMVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSILQTAM 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00028 208 Pfam YGGT family 135 203 IPR003425 GO:0016020
Cca11g00028 208 PANTHER YLMG HOMOLOG PROTEIN 1-2, CHLOROPLASTIC 28 207 - -
Cca11g00028 208 PANTHER YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC 28 207 IPR003425 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00028 Cca-Chr11 326466 329441 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00028 - - gmx:100819562 252.292