Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00027 ATGGGTTCGAGATTCCCATCTCATCAGCTCAGCAATGGCTTGTATGTATCAGGCCGGCCTGAACAGCCGAAAGAAAAGACTCCGACGATGAGCTCAGTTGCCATGCCCTATACTGGTGGTGACATCAAGAAGTCTGGAGAATTAGGAAAAATGTTCGATATCCCCATGGATGGCTCTAAATCTAGAAAATCCGGTCCCTTAAATAATGCTCCTTCCAGGACAGGATCATTTGCAGGTGCTGCTTCACACTCTGGACCTATCATGCAAAATGCTGCAGCTCGCTCTGTTTATATCACATCTGGTAATGTATCTGCTGGAGGCATGTCTGCTTCAGCCTCAATGAAAAAGACCAACTCTGGTCCATTGAATAAACATGGGGAACCGGTCAAGAAGTCATCTGGCCCTCAATCTGGTGGAGTTACCCGCCAAAACTCTGGTCCAATTCCCCCAGTTCTTCCTACGACCGGTCTTATTACATCTGGCCCATTAAATTCATCTGGGGCTCCAAGGAAAGTGTCTGGTCCATTAGATTCTACTGGATCACTGAAATCATATAGTTCCTTTGTAGCCCACAATCCTGCTGTAACCACTCTTAGCCTAGATGACGAGTATTCCTTCAGGAGGAACTTCCCAAAGCCAATATTGTGGTCTGTGATTCTGATTTTTATAATGGGGTTCATTGCTGGCGGTTTTATTCTTGGAGCAGTCCGCAATGCCATTCTCCTCATTGTTGTCGTAGTACTTTTTGGTACGGTTGCTGCATTATTCACTTGGAATAGTTGTTTTGGAAGGAAAGCCATTGTTGGTTTCATTTCTCGTTATCCAGATGCAGAGCTTAGAACTGCCAAGAATGGGCAATTTGTGAAGGTTTCTGGGGTGGTGACCTGTGGTAATGTTCCATTAGAGTCCTCCTTTCAAAAAGTTCCTAGATGTGTATATACATCCACCAGCTTATATGAATATCGAGGATGGGATTCAAAAGCAGCAAACCCAAAACATCGCCGTTTTACATGGGGGCTTAGATCAGCTGAGAGGCATGTGGTGGACTTTTACATATCTGATTTCCAATCTGGATTGAGAGCATTGGTTAAAACAGGCTATGGTGCAAGGGTGACACCTTATGTCGATGATTCCATTGTTATTGATGTTAATCCGGCCAACAAAGACATGTCCCCCGAGTTTCTTCGATGGTTGGCAGAGAGAAAACTTTCTAGCGATGATCGCATAATGCAATTAAAAGAAGGGTACATCAAAGAAGGTAGCACGGTTAGTGTAATGGGAGTTGTTCAAAGAAATGACAATGTGCTTATGATTGTCCCTCCGCCTGAGCCTTTGACTACAGGATGCCAATGGGCCAAATGTATATTTCCTGCTAGCCTTGAGGGTGTTGTTTTGAGATGTGAAGATACGTCAAAGATTGATGTCATTCCAGTGTAG 1437 0.4426 MGSRFPSHQLSNGLYVSGRPEQPKEKTPTMSSVAMPYTGGDIKKSGELGKMFDIPMDGSKSRKSGPLNNAPSRTGSFAGAASHSGPIMQNAAARSVYITSGNVSAGGMSASASMKKTNSGPLNKHGEPVKKSSGPQSGGVTRQNSGPIPPVLPTTGLITSGPLNSSGAPRKVSGPLDSTGSLKSYSSFVAHNPAVTTLSLDDEYSFRRNFPKPILWSVILIFIMGFIAGGFILGAVRNAILLIVVVVLFGTVAALFTWNSCFGRKAIVGFISRYPDAELRTAKNGQFVKVSGVVTCGNVPLESSFQKVPRCVYTSTSLYEYRGWDSKAANPKHRRFTWGLRSAERHVVDFYISDFQSGLRALVKTGYGARVTPYVDDSIVIDVNPANKDMSPEFLRWLAERKLSSDDRIMQLKEGYIKEGSTVSVMGVVQRNDNVLMIVPPPEPLTTGCQWAKCIFPASLEGVVLRCEDTSKIDVIPV 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00027 478 MobiDBLite consensus disorder prediction 107 153 - -
Cca11g00027 478 MobiDBLite consensus disorder prediction 62 79 - -
Cca11g00027 478 PANTHER OSJNBA0035M09.9 PROTEIN 1 478 IPR040339 -
Cca11g00027 478 MobiDBLite consensus disorder prediction 134 150 - -
Cca11g00027 478 MobiDBLite consensus disorder prediction 1 16 - -
Cca11g00027 478 PANTHER UBIQUITIN-SPECIFIC PROTEASE FAMILY C19 PROTEIN 1 478 - -
Cca11g00027 478 MobiDBLite consensus disorder prediction 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00027 Cca-Chr11 317146 323638 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00027 - - gmx:100775520 922.154