Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00026 ATGGATAAAGTCGGCGTGTCCATGATGGTGTTGGTGTTGGTATTGATGTGCTTCTCTGTTACTAATGGAGATGAAGAAGAGGAGAGGAAGAAAGCATCTTTGTGGGAGTGGGAGAAACTCAGAACTGCTTACCCTGCCTATTCAGCACTTTTTTCTTCAAATATTGCTCGCACTTTTAAGGGCCTTCTCACTCATTTCTTTCGTCCAAATATAGACTTTAGAAGAGGCAATGAAGGACAAGGCGTGAGAGGAGGAGAGGTGGTGAAGGAAGCTGTGGCAAAAAGCATAGATACCGTCGGGGATGCCGCTAAAGCAGCAGCGGAAACAGTGCACAATGTGAAGGAGAGGACCTTGTCGCAGAACAAACAAACACAACTACATGTTAAGACAGAGAGAAAAGAGATGGCGGTGCAGCCTGGTGGTTCCAAGTCGAAATCGAGCAAGAGAGACACTGACACAGTTCACTCTCCCCTCGTCACCTATGCTTCCATGATTTCTCTCCTCACACTCTGTCCTCCATTTGTCATTCTCTTATGGTACACCATGACACTTGCTCATGGATCTCTTCTCCAAACCTTTGATTACTTGAGCCAAAACGGGCTACAGGGCTTCCTACTTATATGGCCCAAGCCCACTGCCACTGCTTGCAAAATCATCGCCATCTACGCTGCTTTTGAAGCAGCGCTTCAGCTTCTTCTCCCCGGCAACACCGTTTACGGCCCTATTTCCCCAACCGGCCACCGCCCTGTCTACAAGGCAAATGGTGTCGCAGCTTATTTAGTCACCTTGGTTACTTATATTGCCCTTTGGTGGTTTGAGATTTTCGACCCCACTATTGTTTATGATCGTTTGGGGGAAATATTTTCAGCGCTTATCTTCGGGAGCTTTGTCTTCTGTGTTTTCTTATACATAAAAGGTCATTTGGCACCATCTTCCACAGATTCAGGCTCTTCTGGAAACATAATCATTGATTTTTACTGGGGTATGGAGCTCTATCCACGCATAGGAAAATATTTTGACATAAAAGTTTTCACAAACTGCAGATTCGGAATGATGTCATGGGCTGTTCTTGCATTGACCTACTGCATAAAGCAGTATGAAGAAAATGGAAAAGTAGCTGACTCAATGCTTGTAAATACTGCATTAATGCTGGTATACATTACCAAGTTTTTCTGGTGGGAAGCTGGATATTGGAACACAATGGATATTGCACATGATCGAGCTGGATTTTATATTTGCTGGGGTTGCTTGGTGTGGGTTCCATCAGTGTATACATCTCCTGGAATGTACCTTGTCAACCATCCTGTATATCTTGGCACCCAGCTAGCAGTCACAATTTTAGTAGCTGGCATTCTTTGCATATACATCAACTATGACTGTGACAGGCAAAGGCAAGAATTTCGTAGGACAAATGGAAAATGCACGGTCTGGGGAAAAGCTCCATCAAAGATAGAGGCCTCATATACTACTACTGCTGGGGAAACTAAAAGAAGCCTTCTTTTAACCTCTGGATGGTGGGGATTATCTCGTCATTTTCATTATGTCCCTGAAATATTAGCTGCTTTCTTCTGGACAGTCCCGGCTCTTTTCAATCATTTTTTGCCTTACTTCTACGTGATATTTCTTACCATTCTTCTCTTTGATCGAGCAAAACGAGACGATGATCGATGCAGATCCAAGTATGGCAAGTTCTGGAAGTTATATTGCGACAAGGTACCTTACAGAATCATTCCAGGAATATCTGGTCGGGCGCGGAGAGTTCACCCTTTCATTCAAGCTTTCGTTTTCGGTGCGATTTTGAGTCCTTTCATTTTCTCATCCTTTGCGATTTAA 1833 0.4392 MDKVGVSMMVLVLVLMCFSVTNGDEEEERKKASLWEWEKLRTAYPAYSALFSSNIARTFKGLLTHFFRPNIDFRRGNEGQGVRGGEVVKEAVAKSIDTVGDAAKAAAETVHNVKERTLSQNKQTQLHVKTERKEMAVQPGGSKSKSSKRDTDTVHSPLVTYASMISLLTLCPPFVILLWYTMTLAHGSLLQTFDYLSQNGLQGFLLIWPKPTATACKIIAIYAAFEAALQLLLPGNTVYGPISPTGHRPVYKANGVAAYLVTLVTYIALWWFEIFDPTIVYDRLGEIFSALIFGSFVFCVFLYIKGHLAPSSTDSGSSGNIIIDFYWGMELYPRIGKYFDIKVFTNCRFGMMSWAVLALTYCIKQYEENGKVADSMLVNTALMLVYITKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVYLGTQLAVTILVAGILCIYINYDCDRQRQEFRRTNGKCTVWGKAPSKIEASYTTTAGETKRSLLLTSGWWGLSRHFHYVPEILAAFFWTVPALFNHFLPYFYVIFLTILLFDRAKRDDDRCRSKYGKFWKLYCDKVPYRIIPGISGRARRVHPFIQAFVFGAILSPFIFSSFAI 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00026 610 ProSitePatterns Sterol reductase family signature 2. 545 568 IPR018083 GO:0016628
Cca11g00026 610 PANTHER 7-DEHYDROCHOLESTEROL REDUCTASE 151 580 - -
Cca11g00026 610 Gene3D - 349 580 - -
Cca11g00026 610 MobiDBLite consensus disorder prediction 116 151 - -
Cca11g00026 610 PANTHER DELTA(14)-STEROL REDUCTASE 151 580 - -
Cca11g00026 610 ProSitePatterns Sterol reductase family signature 1. 319 334 IPR018083 GO:0016628
Cca11g00026 610 Pfam Ergosterol biosynthesis ERG4/ERG24 family 205 580 IPR001171 GO:0016020|GO:0016126|GO:0016628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00026 Cca-Chr11 299454 316468 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00026 152 580 Miscellaneous Gene Families AT1G50430 83.217 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00026 K00213 - gmx:102659420 828.935