Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00021 ATGGAGTTTTTGAAAATCAAGAAGTTCAGAAAATCTCATAAGGCAGATGGAGACAAGGATTTGGCAGACAAGGCAGCCCCAGAGCCTGAGGAGCCAAAGCTGAACACAGATGGTTCTGATCAGTGTAAATCAGAAAATGCAGATTCTGCAGGTGAAGCTGAGGATGACGATGATTTTATTACCAATGAGGTAAAGAGGAGGCTGAAAGAACTGAGAAGAAACAGTTTTATGGTGTTGATTCCTGAAGAAGATTCCTGCCCagaggatggggaggacgaagaggaagagggagagACAAGCTCAAATGAATGGAGGGATGTGGAGGCAGAAGGTCAGCAATGGTGGCGTGGTTTTGATGCTGTGTTTGAAAAGTACTGTGAAAGAATGTTATTCTTTGATCGGATGAGCACTCAACAGCTTAGTGAAGTTGGCAAAGGTTTACGGCACACTTCAACACCATCTCCAAGATCTGCATCAAAGAAGCTAGCTTCTCCCCTTCGTTGTCTTTCCTTGAAAAAATTTGAAGGACCTGATGATGAGACCGAACATCTTCAACAGCCTGAGAATGACCCCTACCATGATATTGAAACAGCATATGTCGGTCAAATTTGCTTGACATGGGAGGCACTTCATTGTCAGTACTCTCATATGAGTCAGAAGATATCATGGCAACATGATAATCCTACCTGTTACAACCACAGTGTGCAAGAGTTTCAACAGTTCCTGGTTCTATTACAAAGGTTTATTGAAAATGAACCTTTTGAGCAGGGTCATCGAGCAGAAATTTATGCTCGCACAAGAAACAATTTGCCTAAATTGCTTCAGGTTCCTAATATACGAGGTTCAGATCATGTATTGACTGATGATTCAGAGACGAAAGTTCTTGCTCCTGATCTTATCAGGATAATTGAAAGCTCTATCCTTACTTTCCACCTTTTCCTGAAAAGAGACAAGAAAAAATCAAGTGGTGCTACCAACCTGTTTGGAAATCAGAACCAGCTTGCAACTCCTTTACAACAGATTCATTCTACTCTTGAAAAGAAAGTGGTGAAGCTGAAGGAACTGCGCCGAAAGAAAAAAGGTTGGAAGAAGAATTCTTGGCCCCAAAAGCATGAGGACATTCAGCTTTTGCTTGGCCTTATTGACTTGAAGATTCTATCAAGGGTTCTGAGAATGACGAGGATGACTAGAGAACAACTTTTTTGGTGTGAAGAAAAGATAAAAAAACTGGATTTATCAAATAATAGGTTAGAGAGGGATCCATGTCCTGTCCTGTTCCCTTGCTAG 1287 0.4002 MEFLKIKKFRKSHKADGDKDLADKAAPEPEEPKLNTDGSDQCKSENADSAGEAEDDDDFITNEVKRRLKELRRNSFMVLIPEEDSCPEDGEDEEEEGETSSNEWRDVEAEGQQWWRGFDAVFEKYCERMLFFDRMSTQQLSEVGKGLRHTSTPSPRSASKKLASPLRCLSLKKFEGPDDETEHLQQPENDPYHDIETAYVGQICLTWEALHCQYSHMSQKISWQHDNPTCYNHSVQEFQQFLVLLQRFIENEPFEQGHRAEIYARTRNNLPKLLQVPNIRGSDHVLTDDSETKVLAPDLIRIIESSILTFHLFLKRDKKKSSGATNLFGNQNQLATPLQQIHSTLEKKVVKLKELRRKKKGWKKNSWPQKHEDIQLLLGLIDLKILSRVLRMTRMTREQLFWCEEKIKKLDLSNNRLERDPCPVLFPC 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00021 428 Coils Coil 338 365 - -
Cca11g00021 428 MobiDBLite consensus disorder prediction 143 163 - -
Cca11g00021 428 MobiDBLite consensus disorder prediction 84 101 - -
Cca11g00021 428 PANTHER DUF1666 FAMILY PROTEIN (DUF1666) 1 428 - -
Cca11g00021 428 PANTHER DNA LIGASE (DUF1666)-RELATED 1 428 - -
Cca11g00021 428 MobiDBLite consensus disorder prediction 1 38 - -
Cca11g00021 428 Pfam Protein of unknown function (DUF1666) 193 427 IPR012870 -
Cca11g00021 428 MobiDBLite consensus disorder prediction 79 107 - -
Cca11g00021 428 MobiDBLite consensus disorder prediction 143 159 - -
Cca11g00021 428 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00021 Cca-Chr11 261755 265510 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00021 - - gmx:100804417 716.457