Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00007 ATGAATATgacgacgacgacgacgacgacgaGTGTGTTAGACATGTATGGCATCGTTGCGGCTGTTGTTGTGTTCCTTATATTGTTGCTTTGGCAGCGTAACAGATTGTTCTTTGCTGCATCTCCATCTCCATCCACTTCCTTTTTCGTCTCCGATTCTATCACTTCAAACTCCAGAACCTCAAATTTTGTGACAGATGCTGATTTGAAATTTTTAATGGAGATTTTGGATGAGAAGCTCAATGAGAGTGATAAATGGGAGGATGTTCTGGATAGAAGGATTGATCATCTATGCTACAATGTGAAATGCTGCAAGCCTAAGAATGGTCCCCTGAGATATGTGAGCAAGACTGTGTTCAATAATATTTCATCTGAGATGCTAAGAAACTTCTACATGGATAATGATTACAGAAAGCAGTGGGATAAAACACTGGTTGAGCATAATCAACTGCAGGTGGACAAATCTGATGGTACTGAAGTTGGTCAGACAATTAAAAAGTTCCCTTTTCTAAAGCCTAGAGAATATGTGTTAGCTTGGAAGTTGTGGGAGGGAAGTGATAAAACATTTTACTGTTTTATGAAGGAATGTGAACATCCTTTGACACCACGACAGAAAAAGTATGTACGAGTTGAGTACTACAGATCTGGCTGGCAAATAAGAGAAGTACCTGGTAGTAATGCCTGTGAGATCACAATGTTTCATCAAGAAGATGCTGGTTTAAATATAGAGATGGCTAAGCTGGCTTTCCGCAAGGGCATATGGAACTATGTTTGCAAGATGGATAATGCACTTAGAAGATACTCTGATTTAAGCTATCGTTTATCAAGTTCAGTTACCACTTCAGTCAATTTAATGCAGAAGGTACCTGATTGCTTGGACCCTATCACGAACAACGTATCTCCAGCACATCCTACTGTCTTCCATGATCAAATTACTGATGAACCTCGACTGCGTATGTTCCGAAGGCCATCAAGAAAATTGGTAGCCAATAGTTTGCTGCTTCTTGGGGGTGCTATTTGCTTGTCTCGTGGTCACTCTAGCCTAGGTGCTAAAGTTGCCATGGCATACATCTTAACAAAACTTGGTAAGCGTGGTGCTAGATCAAACCAAGTCAAACAGACTTGA 1125 0.3938 MNMTTTTTTTSVLDMYGIVAAVVVFLILLLWQRNRLFFAASPSPSTSFFVSDSITSNSRTSNFVTDADLKFLMEILDEKLNESDKWEDVLDRRIDHLCYNVKCCKPKNGPLRYVSKTVFNNISSEMLRNFYMDNDYRKQWDKTLVEHNQLQVDKSDGTEVGQTIKKFPFLKPREYVLAWKLWEGSDKTFYCFMKECEHPLTPRQKKYVRVEYYRSGWQIREVPGSNACEITMFHQEDAGLNIEMAKLAFRKGIWNYVCKMDNALRRYSDLSYRLSSSVTTSVNLMQKVPDCLDPITNNVSPAHPTVFHDQITDEPRLRMFRRPSRKLVANSLLLLGGAICLSRGHSSLGAKVAMAYILTKLGKRGARSNQVKQT 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00007 374 Gene3D - 58 269 IPR023393 -
Cca11g00007 374 PANTHER PHOSPHATIDYLCHOLINE TRANSFER PROTEIN 17 373 - -
Cca11g00007 374 Pfam START domain 105 237 IPR002913 GO:0008289
Cca11g00007 374 ProSiteProfiles START domain profile. 57 269 IPR002913 GO:0008289
Cca11g00007 374 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 17 373 - -
Cca11g00007 374 CDD START_STARD2_7-like 64 267 - -
Cca11g00007 374 SUPERFAMILY Bet v1-like 74 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00007 Cca-Chr11 98153 115897 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00007 - - ccaj:109807671 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00007 11 98153 115897 Cca11g00007 11 98153 115897 ECH