Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01252 ATGCTTGGAGCTGTAGCAGCTTCCACAACACTATGCTTTTCACAATCCACAAAAATTGTTCTTCTCAAAAGAATCTCAAATTCAACACTGCCATTGAGCCATGGCCACTCTTTCTCACTCCCATCACCTACCCATCTGCATTTCTCTTCTCACAAGATCACTAGAAGACAACCCCATTTTCTTCCACAAGCTGCTTCATCTTCTGCTGCAAGTGCTGAATACGTGGAGGAACCAGCAACAAATGTGAAATTCCAGACATGTTTGAGTGTTCCGGGTTGCTCAAATTCATTAACTTTGTTTGGAACTGGATACAGAGAGAAAGTTTTTGCGATTATTGGTGTCAAGGTCTACGCTGCAGGTTTGTATCTAGATCAATCTATCACCAGTGAGTTGAATACTTGGAAAGGGCAATCAAAAGAAGCTATTCAAGGGAATTCTTCCTTGTTCAAGACCATTTTCCAATCTTCCTTTGAGAAATCATTACAAATTATCCTTGTCAGAGATGTTGATGGTAAAACCTTTTGGGATGCCTTAAGTGAAGCCATATCACCAAGAATTCCAGAACCTACAACTGCAGATGAAACTGCTTTGAGCACTTTCCGTAGTGTCTTTCAAGATCGCCCTCTTAAGAAAGGAACTTTAATAATCTTGACTTGGTTGAACCCTGCAAGATTGCTTGTTTCTGTCTCCTCACAAGGGCTTCCATCTACTGTGGATGCTACAATTGAATCTGCAAATGTGGCTTCTGCTCTTTTCAATGTATTCCTTGGTGATAGTCCTGTTTCTCCTTCCTTGAAAGGTTCAGTGGCTGAAGGTTTGTCAAAAGTACTCAAATAA 837 0.4074 MLGAVAASTTLCFSQSTKIVLLKRISNSTLPLSHGHSFSLPSPTHLHFSSHKITRRQPHFLPQAASSSAASAEYVEEPATNVKFQTCLSVPGCSNSLTLFGTGYREKVFAIIGVKVYAAGLYLDQSITSELNTWKGQSKEAIQGNSSLFKTIFQSSFEKSLQIILVRDVDGKTFWDALSEAISPRIPEPTTADETALSTFRSVFQDRPLKKGTLIILTWLNPARLLVSVSSQGLPSTVDATIESANVASALFNVFLGDSPVSPSLKGSVAEGLSKVLK 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01252 278 Gene3D - 84 255 IPR016088 -
Cca10g01252 278 PANTHER FATTY-ACID-BINDING PROTEIN 3, CHLOROPLASTIC 41 277 - -
Cca10g01252 278 Pfam Chalcone-flavanone isomerase 81 275 IPR016087 GO:0016872
Cca10g01252 278 Gene3D - 127 273 IPR016089 -
Cca10g01252 278 PANTHER FATTY-ACID-BINDING PROTEIN 3, CHLOROPLASTIC 41 277 - -
Cca10g01252 278 SUPERFAMILY Chalcone isomerase 74 278 IPR036298 GO:0016872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01252 - - gmx:100804241 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01252 10 16595140 16598531 Cca10g01252 10 16595140 16598531 ECH