Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01250 ATGGCTAATAGAGAAATTGAAGCCTCCCCACTCTACCATCCAGGACATAACCTTGTAGCAGATAATGCTCTCAAAGAAGAATCAATTGCAGTAACTGTTTCAACCACAACTAATGAAGATGATGAACAACCACTCTTCAAGCATGGACGTTGGAAGTGGTGGATTTTAGTAGTGATCAACGTAGCCTTACTCTTGATTGGCCAATCTGGTGCAGTTTTGTTGGGGAGATACTACTTTGACCAAGGTGGAAAAAGTATATGGATGGTAACACTAGTACAAACTGTGGCATTCCCTATCCTTTTCTTACCAATTTTCCTCTTTCCTCACCCCAAAAACCTTTCTGACACCCCCATGCACTCTTCTTCCATTCACACTCTCATCATGGTTTACTTCCTATTGGGAATCCTATTAGCTGGGGATAACTTGATGTACACAATAGGGCTTCTATATCTTCCTGTGTCCACTTACTCTCTCATTTGTGCATCCCAGCTTGCTTATAATGCCATCTTTTCCTTCTTCATCAACTCTCAGAAACTCACCTTGTTAATACTCAACTCAGTGATTCTCCTCACAGTGTCAGCTGCACTTATAGCAGTTCATTCTGACTCATCAGAGGACAAAGCCAGGAATGTTACAAGGAACAAACACATGGTGGGCATTTGGTGCACTCTTGGTGCATCAGCAGGGTATGCCCTTTTGCTGTGTCTGATGCAGCTATCATTTCAAAGGGTGTTGAAGAGGGAAACATTTTCTGTTGTCCTAGAAATGCAACTTTGGACATCTTTTGTTGCTTCTTGTGTTTGCATAGTGGGGCTTTTTGCCAGTGGAGAAGGGCAAGGCTTGAAGGATGAGATTAGGAGGTTCAAGGCAGGGAGAGAGGTTTATATGTTGACATTGATTGGAACAGCTTTGGCTTGGCAAATTTGTTCTGTTGGGGTTATAGGGCTAATCTATTTGGTGTCTTCACTATTCTCTAATGTTATGAGCATGATGAGCTTGCCACTTGTTCCTGTTGCTGGAATCATTTTTTACCATGAACAAATGGGTGCACTAAAGATTGTGGCCATGTTGTTGGCCATCTTGGGTTTCAGTTCTTATATCTACCAAAATTATTTGGATGAAAACAAGTCCAAAGCAACAGCAATTTGTCCTAAAGCCACCCCAGAAACCTCTATACCCGGATAA 1185 0.4203 MANREIEASPLYHPGHNLVADNALKEESIAVTVSTTTNEDDEQPLFKHGRWKWWILVVINVALLLIGQSGAVLLGRYYFDQGGKSIWMVTLVQTVAFPILFLPIFLFPHPKNLSDTPMHSSSIHTLIMVYFLLGILLAGDNLMYTIGLLYLPVSTYSLICASQLAYNAIFSFFINSQKLTLLILNSVILLTVSAALIAVHSDSSEDKARNVTRNKHMVGIWCTLGASAGYALLLCLMQLSFQRVLKRETFSVVLEMQLWTSFVASCVCIVGLFASGEGQGLKDEIRRFKAGREVYMLTLIGTALAWQICSVGVIGLIYLVSSLFSNVMSMMSLPLVPVAGIIFYHEQMGALKIVAMLLAILGFSSYIYQNYLDENKSKATAICPKATPETSIPG 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01250 394 PANTHER PURINE PERMEASE 19-RELATED 34 384 - -
Cca10g01250 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 122 202 - -
Cca10g01250 394 Pfam Purine nucleobase transmembrane transport 55 376 - -
Cca10g01250 394 PANTHER OS09G0467300 PROTEIN-RELATED 34 384 IPR030182 GO:0015211|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01250 Cca-Chr10 16587002 16588374 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01250 38 376 Organic Solute Cotransporters AT4G08700 49.280 6.97e-110 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01250 - - gsj:114375891 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01250 10 16587002 16588374 Cca10g01250 10 16587002 16588374 ECH