Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01223 ATGCACGCTTCCATTCGAGACGCCGTTGGAGGAACAATGGCCATAGTCCAATCGTCGCCCGCCACGTGGCAGTCCGCACTTCTCAGCAACGCTCTGATCTTCCTCCTCGGCACTCCCCTTCTCGTCGCCGGCTTGTCGCTCTCCGGCATCGGAGCGGCGTTCCTGCTCGGAACGCTCACCTGGCGCGCTTTTGGGCCTTCTGGGTTCTTGCTTGTTGCCACTTACTTTGTCATTGGTACAGCTGCGACAAAGGTCAAAATGGCGCAGAAAGTAGCTCAGGGGGTTGCTGAGAAAAGAAGAGGAAGAAGGGGTCCGGGCAGTGTTATTGGATCCAGTGCTGCTGGTTGCATTTGTGCTTTCCTCACAATTTTTGGTGTTGGGGGAGAGGCATTTTCTCGGCTTTGGAGACTAGGGTTTGTTGCCAGTTTCTGTACCAAGTTGAGTGACACAGTCTCAAGTGAGATCGGGAAGGCATATGGAAAAATAACGTACCTAGTTACAACATTCAAGGTAGTTCCAAGAGGCACAGAAGGGGCTGTTAGTGTTGAAGGAACTTTGGCTGGCATTTTAGCAGCCATAGCTCTTGCATTTGTCAGTTTTCTCATGGGTGAGGTACTTCACTAA 624 0.5176 MHASIRDAVGGTMAIVQSSPATWQSALLSNALIFLLGTPLLVAGLSLSGIGAAFLLGTLTWRAFGPSGFLLVATYFVIGTAATKVKMAQKVAQGVAEKRRGRRGPGSVIGSSAAGCICAFLTIFGVGGEAFSRLWRLGFVASFCTKLSDTVSSEIGKAYGKITYLVTTFKVVPRGTEGAVSVEGTLAGILAAIALAFVSFLMGEVLH 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01223 207 PANTHER TRANSMEMBRANE PROTEIN 19 16 203 - -
Cca10g01223 207 PANTHER TRANSMEMBRANE PROTEIN 19 16 203 IPR002794 GO:0016021
Cca10g01223 207 Pfam Integral membrane protein DUF92 34 202 IPR002794 GO:0016021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01223 - - gmx:100818598 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01223 10 16047379 16054090 Cca10g01223 10 16047379 16054090 ECH