Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01211 ATGGTGTTCACACTCTGGTTGGGGCCTCTGATACTGGCCTCAGCTTTTGCATGGACAGTGGCAGCATTCCAAGGGTGTGATTTTTCTCAAGGGAAATGGGTCATTGATGAACCTTCCCTCCACCCTCTCTATGATCCCTCAAGGGACTGTCCCTTCATTGGCCAAGGATTTGATTGCTTGAGAAATGCCAGGCCAGATAAGGACTACCTTAAGTATAGATGGCTGCCCTCAACTTGTGAACTTCCAAGGTTTGATGGAAGGAAGTTTTTGGAGAGCAACAAAGGAAAGAAGATAATGTTTGTGGGGGACTCCATAAGTAACAACATGTGGCAGTCACTTACTTGTTTGCTTCACAATGCAGTCCCAAACTCAAGCTACACCTTAACAAGTCAAACACCGGAACTTTCTGTATTCTCATTCCCGGAATATGGAGCTTCAATCATGTGGTTGAAAAATGGGTTCCTAGTGGATTTGGTTTATGACAAAGAAAAAGGGAGGATTTTGAAATTGGACAGCATTAGCTCTGGGGACCAGTGGAAAGGAGTGGATGTTTTGATTTTCAACAGTTACCATTGGTGGACTCACACTGGAAAGTCTCAAACATGGAATTACTTTGAAGTGGGTGGGAAATTGATCCAGGACATGGATCACTTGGAAGCTTTCAAGATTGGGCTGAGCACTTGGGCTAAATGGGTTGATTCTAACATTGATACATCAAAGACTAGAGTCTTGTTTCAGGGAATTGCTGCTTCCCATGTTGACAAAACGGGGTGCCTAAGGAAAACTAAACCAGATGAAGGAACAATGGCACCATATCCTGGTGTGGACATAGTGAAGAGTGTTCTAAGTAACATGACAAAGCCTGCGCAATTGCTTGACATAACTCTGCTCACACAACTGAGGAGGGATGGTCACCCCTCTATCTACACAGGACGAGGCACTTCTTTTGATGACTGTAGTCATTGGTGTCTGGCTGGTGTTCCTGATGCATGGAATGAAATATTGTATGCTCTTCTGCTTGGAAATTAG 1029 0.4422 MVFTLWLGPLILASAFAWTVAAFQGCDFSQGKWVIDEPSLHPLYDPSRDCPFIGQGFDCLRNARPDKDYLKYRWLPSTCELPRFDGRKFLESNKGKKIMFVGDSISNNMWQSLTCLLHNAVPNSSYTLTSQTPELSVFSFPEYGASIMWLKNGFLVDLVYDKEKGRILKLDSISSGDQWKGVDVLIFNSYHWWTHTGKSQTWNYFEVGGKLIQDMDHLEAFKIGLSTWAKWVDSNIDTSKTRVLFQGIAASHVDKTGCLRKTKPDEGTMAPYPGVDIVKSVLSNMTKPAQLLDITLLTQLRRDGHPSIYTGRGTSFDDCSHWCLAGVPDAWNEILYALLLGN 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01211 342 Pfam PMR5 N terminal Domain 25 80 IPR025846 -
Cca10g01211 342 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 18 342 - -
Cca10g01211 342 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 81 337 IPR026057 GO:0016740
Cca10g01211 342 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 18 342 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01211 Cca-Chr10 15790555 15793882 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01211 - - gmx:100818058 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01211 10 15790555 15793882 Cca10g01211 10 15790555 15793882 ECH