Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01210 ATGGGTGTGCGCGTTCAATGttgttcttctttcttcttcttcttctttttcctttttctCGGGTTAGCTTCGAAAGTGAGAGGAAACGGGTCGGGTTGGGATTCGAAGCAGTGCGATTGGTTCACGGGAACATGGGTGGTGGATGAATCGTACCCGCTCTATCAGCCGGACACGTGTCCCTTCATCGAGCGCGAGTTCAGGTGCCAAGGGAATGGACGCCCTGATCTGATTTACACCCACTATAGATGGCACCCACTTGCCTGCAATTTGCTCAGATTTGATGGGGTTGATTTTTTGGAGAAGATGAGAGGGAAGAGCATCATGTTCGTGGGAGATTCACTGAGCAGGAACCAATGGCAGTCCTTGACTTGCTTGCTTCATTCAGCAGTGCCCAATTCCAATTATACTTTGGTTAGAGTTGGAGATGTTTCTATTTTCACATTTACGGAGTATAGAGTTAAAGTGATGCTAGATAGGAACGTGTATCTAGTTGACGTTGTGAAAGAGAATATTGGGAGGGTCTTGAAGCTTGATTCAATAGAAGGAAGCAAGCTTTGGCAAGGGATTGATATGCTTATCTTCAACACATGGCACTGGTGGTCCCGTAGAGGACCCACTCAACCATGGGATTATATCCAATTGGGAGGTCAAATCTTGAAAGACATGGATCGGATGAAGGCTTTTGAAGAAGCACTTAAGACATGGGGTGCATGGGTAGACACCAACGTTGACCCTAAGAAAGTGAAGGTCTTCTTTCAAGGAATTTCACCATCTCACTACAATGGCAGCCTATGGAATGAACCAAGTGCAAAGAGTTGCATCCGGCAGAAGACACCTGTGCCGGGATCGGTGTATCCGGGTGGACCGCCGGCGGCGGTGGCGGTGTTGAAGAGTGTGCTGAGCACAATCAAGAAACCAGTGACACTTCTTGACATCACAATGCTTTCTCTGCTTCGGAAAGATGGACACCCTTCCATTTATGGACTCACTGGAGCCTCTGGAATGGATTGCAGCCATTGGTGTCTTCCTGGGGTTCCAGATACTTGGAATGAGATACTTTACAACCTTATATGA 1074 0.4609 MGVRVQCCSSFFFFFFFLFLGLASKVRGNGSGWDSKQCDWFTGTWVVDESYPLYQPDTCPFIEREFRCQGNGRPDLIYTHYRWHPLACNLLRFDGVDFLEKMRGKSIMFVGDSLSRNQWQSLTCLLHSAVPNSNYTLVRVGDVSIFTFTEYRVKVMLDRNVYLVDVVKENIGRVLKLDSIEGSKLWQGIDMLIFNTWHWWSRRGPTQPWDYIQLGGQILKDMDRMKAFEEALKTWGAWVDTNVDPKKVKVFFQGISPSHYNGSLWNEPSAKSCIRQKTPVPGSVYPGGPPAAVAVLKSVLSTIKKPVTLLDITMLSLLRKDGHPSIYGLTGASGMDCSHWCLPGVPDTWNEILYNLI 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01210 357 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 9 357 IPR029962 GO:0016413
Cca10g01210 357 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 92 355 IPR026057 GO:0016740
Cca10g01210 357 Pfam PMR5 N terminal Domain 36 89 IPR025846 -
Cca10g01210 357 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 41 9 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01210 Cca-Chr10 15766839 15771802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01210 - - gsj:114377931 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01210 10 15766839 15771802 Cca10g01210 10 15766839 15771802 ECH