Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01205 ATGTCTGTGGAGAGGTCGTTTGAGGCTTGGGAAGAGGTGCAGCGTCACGGGCAGGACCTAGCTGACCGGCTTGCCCAGGGTTTCAGTGGATTGATCCAGACGCACATGAGTCCTCCGCAGTTTGCGTGGCCGAATCCTCCGACGTCGAAGCTCTTCGATCTGGAGTTTCCGTCGCAGAGCTTCGGGAAGAGGGATTTCGCGCTGGCGACGGAGGAGTATGGGATAAATGGGGTGTCCGCGATTTTCGACATCGGTAGCCGGATAGGCCAGGCTGGGGCGGACTTTGGGGCTAGCTTGAATGGGCTGGTTCAGCAGTTTTTCCGCTCGTTGCCGGTGCCGGTGCCGTTCAAGCACGAGGAGAGTTCggtgagggtggaggctggggataaggggtggcagagaggagggATTGGGCTCGTTGTGCAGGAGGATTTGGGGTTGGGGTCACTTAGTGAGAGGTTGAAGAATCATGGGTTTGCTGAGAgtgttagtggtagtggcggtggaggtggaagtgcggaggaagaggttggtggcggtggtggcagcggtggtgctgctgctggtggGTTTAACCTTGGGTCTATCGGTCTTCTGGGCAGGCGACAGGGAATAATAAATTTTACATCTACTTATGATAGTAGAACTCAAGAAGTGGAAGGTTCTTTAGTTGCAAGGGGAGATTTGTGGAGAGTAGAGGCATCGCATGGTGGTTCTACATCTGGAAATGAAAATTCATCCCTTTTCCTGGTTCAGCTTGGACCTCTTCTCTTTATTCGTGATTCAACTCTTCTCCTCCCTGTTCATTTGTCCAAGCAGCACTTGCTGTGGTATGGCTACGATAGAAAGAATGGAATGCATTCTCTTTGTCCAGCAGTGTGGTCAAAACACAGAAGGTGGCTTTTAATGTCCATGCTTTGCCTGAATCCCATAGCTTGTTCATTTGTGGATCTTCAATTCCCTAATGGGCAATTAACCTACGTATCTGGTGAGGGTCTAAGTACCAGTGCATTCCTTCCTATTTGTGGAGGTCTTCTTCAAGCGCAGGGTCAATATCCTGGGGAAATGAGATTCAGCTTTTCATGCAAGAACAAGTGGGGAACAAGAATCACACCGATGGTACAGTGGCCCGACAAATCGTTTTCTTTGGGTCTTGCTCAAGCGTTGGCCTGGAAGCGATCTGGTCTTATGGTGAGGCCATCCGTTCAATTCAGTGTTTGTCCTACACTTGGCGGAAGCAATCCAGGGTTGCGAGCAGAACTCATTCATTCAGTTAAAGAGCAACTTAATCTGATTTGTGGATGTGCTTTCATGACATATCCTTCTGCATTTGCTTCAGTATCTATTGGAAGATCAAAATGGAATGGGAATGTAGGGAACTCAGGTCTGGTTCTAAGAGTCGATGTTCCTCTCTCCACTGTTGGGCGCCCTTCCTTCTCTGTTCAGTTAAATAGTGGCATTGAGTTTTGA 1470 0.4442 MSVERSFEAWEEVQRHGQDLADRLAQGFSGLIQTHMSPPQFAWPNPPTSKLFDLEFPSQSFGKRDFALATEEYGINGVSAIFDIGSRIGQAGADFGASLNGLVQQFFRSLPVPVPFKHEESSVRVEAGDKGWQRGGIGLVVQEDLGLGSLSERLKNHGFAESVSGSGGGGGSAEEEVGGGGGSGGAAAGGFNLGSIGLLGRRQGIINFTSTYDSRTQEVEGSLVARGDLWRVEASHGGSTSGNENSSLFLVQLGPLLFIRDSTLLLPVHLSKQHLLWYGYDRKNGMHSLCPAVWSKHRRWLLMSMLCLNPIACSFVDLQFPNGQLTYVSGEGLSTSAFLPICGGLLQAQGQYPGEMRFSFSCKNKWGTRITPMVQWPDKSFSLGLAQALAWKRSGLMVRPSVQFSVCPTLGGSNPGLRAELIHSVKEQLNLICGCAFMTYPSAFASVSIGRSKWNGNVGNSGLVLRVDVPLSTVGRPSFSVQLNSGIEF 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01205 489 MobiDBLite consensus disorder prediction 161 181 - -
Cca10g01205 489 PANTHER OS01G0729900 PROTEIN 1 489 - -
Cca10g01205 489 PANTHER OS01G0729900 PROTEIN 1 489 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01205 - - gmx:100794833 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01205 10 15552018 15558481 Cca10g01205 10 15552018 15558481 ECH