LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca10g01201	ATGGCTATCCTCAGTACCCTCTTCTCTCGCCGCACCCATTCCCTCCTCAACCTCAAACTCAAAACCCCTCACAGGCCCACCGCATCCCAACCCAAAGCCCCATCAGGCCCAGACCCCCAAACCCGGCCCACCAAGAAGCAGCCCCTCCACGCCCTCTTCACCGAAGCCGTGGGCCTCTCGGAGAAAACCCCCTCCGACGAAGAACCATCGCCAGAAAGCGCAACAGAACTGAGCAACAACCTGAGGCAGTTAGAGCAAGACATAAGGACCTTCAAAGAGAAAACTCCCGTGAGAACCTTATTCGCCGTGTTCACCAATCACCAACCCAAGCCAAAAGAAAACGTGGCTGTTAAAAAGCTTTCACCCGATATGCTTACGTTTGCGCAGTTCTTGCACGAGAAGGGCTATTTTAACGACGCCAATTTCGCCAACGGCATGAAAAGCTTCGACCCTGCTTGGTTCACCAATTTCTTCGCCCTCGGCTATATCAAGTTTGCTGCACACAAATTCGCAAGAGATAATCGAGAAATCGCCAAATGGCTATCGGGAAGTGCCCTGAAGCAAGTGGCTGTATTTGGTTGCCCCAACACCGTCAGAAGTGTTGTCTTCCCTGCTAAAAGACTGCGAAAGTTTTTTGAAGTTCCAGAAAACACTGTTTGCAGTAGATGCTCATTGCAACAATCATGCAAGTTTGCTAATCAAAGTGTATGGCATTGTGACACCAATAATTTGGATTTAATGACAGTAATGAAGGTTATTACTTTGTATGCTTTAGAGTCAGTGCACCCCCAGCTGGTAGTGCCTGATGAAGTAAAGAAGTCCGTTAGTCATTTGCTGAAGGAGGTTGTGAAACTGAGTCAAACCATATAA	870	0.4839	MAILSTLFSRRTHSLLNLKLKTPHRPTASQPKAPSGPDPQTRPTKKQPLHALFTEAVGLSEKTPSDEEPSPESATELSNNLRQLEQDIRTFKEKTPVRTLFAVFTNHQPKPKENVAVKKLSPDMLTFAQFLHEKGYFNDANFANGMKSFDPAWFTNFFALGYIKFAAHKFARDNREIAKWLSGSALKQVAVFGCPNTVRSVVFPAKRLRKFFEVPENTVCSRCSLQQSCKFANQSVWHCDTNNLDLMTVMKVITLYALESVHPQLVVPDEVKKSVSHLLKEVVKLSQTI	289

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca10g01201	289	Coils	Coil	74	94	-	-
	Cca10g01201	289	MobiDBLite	consensus disorder prediction	19	78	-	-
	Cca10g01201	289	PANTHER	ZINC FINGER PROTEIN	23	284	-	-
	Cca10g01201	289	PANTHER	OS01G0203300 PROTEIN	23	284	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cca10g01201	152	286	EF-hand Containing Proteins	AT1G55040	32.867	2.39e-10	59.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca10g01201	-		-	gmx:100796418	384.415

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Cca10g01201	10	15475024	15478194	Cca10g01201	10	15475024	15478194	ECH