Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01194 ATGGGAAACGACAGCGTTTGCAGGCTTTTCTTCTTCCTCGCCCTCTCCCCATGCCTTCTCTATGCCATTTCCCAGGATCACCACATTTTCCTACCGACTGACTCACTGAGTTCGTCGGCGGCGAGTTGCCTTGCAACCGACCCAAACCTTAACTACAAGCCGGTCATCGGAATCCTGTCGCACCCCGGCGACGGCGCCTCCGGCCGCCTCAGCAACGCCACCGGCGTTTCTTACATCGCCGCCTCCTACGTTAAATTTGTGGAGTCCGGTGGCGCTAGAGTTATTCCCCTTCTCTACAATGACTCACCTCAGACCCTTATCAAGAAGCTTGATTTGGTTAATGGAGTGCTCTTCACTGGTGGCTGGGCTACGAGTGGTGTGTATTTGGAAACTCTTAAAAATGTTTTTGAGAAAGCTCTAGAGAAAAATGACGCCGGAGATCATTTCCCAACATTTGCCATCAACTTAGGTGGAAACCTCGTAATAAAGATCGTAAGCGAGCTAACTGATATTCTTGAAACATTTAATGCATCGAGTTTGCCAAGTTCTCTTCAATTGGGGGTGAATGCAAATGCTGAAGGAAGTCTATTTGAAAGGTTTCCTCCAGATTTGTTGACACAGTTGGAGACAAATTGTCTTGTCCTGCACAATCATCGTTATGCCATATCCCCAAGTAAGCTTCAAAACAATGCAAACTTAGCAAGCTTTTTTGAGATTTTGACAACATCTAAGGATAAAGATGATAAGACTTTCGTTTCCACAGCACGTGGTAAGAAATATCCTGTCACTGTCTCCCTATGGCATCCAGAGAAAAATGCCTTTGAATGGGCCACATCTCTAAAAGCCCCTCACACAGAGGACGCTGTTAGGGTTACTCAGTCCACTGCAAACTTTTTTGTGAGGGAAGCTAGGAAATCCTCAAACACACCAGATGCTCAAGAAGTGCGAGATAATCTCATTTACAATTTCAAACCTACTTATGGTGGAACGGCTGGGAAAGGATATGATGAAGTTTACCTCTTTGAATAA 1029 0.4558 MGNDSVCRLFFFLALSPCLLYAISQDHHIFLPTDSLSSSAASCLATDPNLNYKPVIGILSHPGDGASGRLSNATGVSYIAASYVKFVESGGARVIPLLYNDSPQTLIKKLDLVNGVLFTGGWATSGVYLETLKNVFEKALEKNDAGDHFPTFAINLGGNLVIKIVSELTDILETFNASSLPSSLQLGVNANAEGSLFERFPPDLLTQLETNCLVLHNHRYAISPSKLQNNANLASFFEILTTSKDKDDKTFVSTARGKKYPVTVSLWHPEKNAFEWATSLKAPHTEDAVRVTQSTANFFVREARKSSNTPDAQEVRDNLIYNFKPTYGGTAGKGYDEVYLFE 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01194 342 Pfam Peptidase C26 54 270 IPR011697 GO:0016787
Cca10g01194 342 Gene3D - 49 342 IPR029062 -
Cca10g01194 342 PANTHER GAMMA-GLUTAMYL HYDROLASE 1 26 341 - -
Cca10g01194 342 ProSiteProfiles Gamma-glutamyl hydrolase domain profile. 45 342 IPR015527 GO:0008242
Cca10g01194 342 SUPERFAMILY Class I glutamine amidotransferase-like 73 324 IPR029062 -
Cca10g01194 342 PANTHER PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE 26 341 IPR015527 GO:0008242
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01194 Cca-Chr10 15344866 15353481 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01194 K01307 - gmx:547881 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01194 10 15344866 15353481 Cca10g01194 10 15344866 15353481 ECH