Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01191 ATGGGTTGTGCTGGATCTTCACAATCCAAGCCTGATGGGGCAGTAAAAAAGATCCGAAAGCCTAAGCCTTGGAAGCATCCTCAGCCCATAACAAAGACTCAGCTAACGCAATTACGTGATGAGTTTTGGGACACAGCTCCTCACTATGGTGGCCGGAAAGAGATTTGGGATGCTCTTCGAGCTGCTGCCGAGGCTGAACTATCTTTAGCACAAGCAATTGTGGATAGTGCTGGGGTCATTGTCCAGAGTTCTGATTTGACAGTATGCTATGATGAAAGAGGAGCAAAGTATGAGCTACCCAAGTACGTTTTGAGTGAGCCAACTAACCTGATCCGAGACAGTTAA 345 0.4696 MGCAGSSQSKPDGAVKKIRKPKPWKHPQPITKTQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNLIRDS 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01191 114 Gene3D - 31 104 IPR038169 -
Cca10g01191 114 Pfam Ubiquitin-binding domain 16 113 IPR032752 -
Cca10g01191 114 MobiDBLite consensus disorder prediction 1 31 - -
Cca10g01191 114 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 111 - -
Cca10g01191 114 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 1 111 IPR039869 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01191 - - gmx:100306399 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01191 10 15318419 15322998 Cca10g01191 10 15318419 15322998 ECH