Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01181 ATGGCTAAAGACAAGTACAGGTCTTTCTTGCATGATGAGCCTGAGAGCGTTCAGTGGAGACATGGTGGCCCCCCCACTTATGATGAGGTTAACAAGCTTTTTGAAGAAGGAAGAACCAAGGAATGGCCAGAAGGATCATTAGAGGAGACAGTCCAAAATGCTATCAAGTCATGGGAGATGGAGCTCTCACACAAGACTCGCTTACAAGATTTCAAGACAATAAACCCTGACAAGTTCAAGCTCTTTGTCAATGGGAGGGAGGGATTATCTGGAGAGGAAACTCTAAGGCTGGGAAGTTATAATGCTCTGTTGCAAAGTTCTTTGCCAGAAGAGTTGAAGCCTTACAAAGCAGATGAAGAGACTTTTGAATCATCTCATGAAGCCTTCAGATCAGCTTTACCTCGAGGATTTGCTTGGGAAGTGATCAAAGTTTATAGTGGACCACCTGAAATTGCTTTCAAGTTTAGACACTGGGGCTTCTTTGAAGGTCATTTTAAGGGACATGCCCCTACTGGCAACATGGTCCAATTTTATGGCTTGGGAACTGTGAAGGTGGATGACTCTTTGAAAGTTGAAGAGGTGGAGATTTACTATGACCCAGCAGAGATGCTTGGAGGCCTTCTATCAGGGAAGAACACAAATCACACCATAGAGGATGACATTGATGGCACCAAAACTTCAGCACCTTCTCAAAAATGTCCTTTCTCCAAATAA 714 0.437 MAKDKYRSFLHDEPESVQWRHGGPPTYDEVNKLFEEGRTKEWPEGSLEETVQNAIKSWEMELSHKTRLQDFKTINPDKFKLFVNGREGLSGEETLRLGSYNALLQSSLPEELKPYKADEETFESSHEAFRSALPRGFAWEVIKVYSGPPEIAFKFRHWGFFEGHFKGHAPTGNMVQFYGLGTVKVDDSLKVEEVEIYYDPAEMLGGLLSGKNTNHTIEDDIDGTKTSAPSQKCPFSK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01181 237 MobiDBLite consensus disorder prediction 1 24 - -
Cca10g01181 237 SUPERFAMILY NTF2-like 120 204 IPR032710 -
Cca10g01181 237 PANTHER PATHOGENESIS-RELATED FAMILY PROTEIN 2 236 - -
Cca10g01181 237 MobiDBLite consensus disorder prediction 1 18 - -
Cca10g01181 237 Gene3D - 104 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01181 Cca-Chr10 15179373 15181456 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01181 - - gmx:100800305 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01181 10 15179373 15181456 Cca10g01181 10 15179373 15181456 ECH