Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01172 ATGAAGTATTTAATGAAACTAAAATGTAAAAGAGAAGCGGAACATGGAAGTTGGAAGGACCAGGTGGGCCTCGGGAAGGCCCAAAAGCTGGAGACAGAAGAAAGATTGTATATTGTATTTGTAGATACTCTCACTCTCACCATTGAAGCGTTTTACTTTGACAGTACCCTAACACTGTCTCTGTGGGAGATGGAGCCAATTGGGTCAGAGAGTTTTGTGAAGGAAAGTGAAAATCTAGATGAAAAGGTCTTGGAAATGAGTTTAGAAAATGGAGGAGAAATAGTTAAGGCATCTAATGAATCTCTGGCATCTGAATGGGTATGTGAAAGGCCCAATGCTGGTGTCTCTTCTACAGCTTCAGGATGGCCGTCCTTTGATGACATCAAATCGTCTTCTCTGGCATATTCTCTATCGGCAGAAGAACAGGCAACTGTGGCAGTTCTGCAATTGCAGCACAAAGCATTAGAAGCTTGCCAAAAGTTCTTtgttggtgatgctagttctgatggtgacgaagacgacgaagacgatgaggatgaAAGTGAGTTGGAAGATAATTATGATTCTAAAGAATGTGAGGAGTATAAGTTCTTTGAAAAAGTGTTTGCAGAAGATGCTAACTTGAGGAGATATTATGAGAACAATCATAGGGAAGGAGATTTTTATTGTTTGGTTTGTGGAGGTATAGGGAAGAAGGTGTGGAAGAGGTTTAAGGATTGTATTGCACTAATTCATCACTCTACTGCAATACTTAGGACAAAAAGGAGGCGAGCTCACAGGGCATATGCACAGGTCATCTGCAAAGTTGTTGGTTGGGACATTGATCAATTGCCAGCTATTGTGTTAAAGGATTTGGATTCCCCCTTGGCTGGTTCAAGGAAGCTTTTGAGTTCTGTTAAGGAAGATGAGAATCTAGATGGAAAGGTCTTGGAACTGAGCTCAGAAAATGGAGGAGAAATAGTTAAGGAATCTCATGAATCTATGGTTTCGGATGCTGAATGGGTATGTGAAAACCCCAAGGCTGGTGTCTCTTCTACAGCTTCAGGATGGCCTTCCTTTGATGACATCAAATCATCTTCTCTCATTTATTCTCTATCAGCAGAAGAGAAATTAACTGTGGCAGTGCTGCAATTGCAACACAAAGCATTGGAAGCTTGCCAGAAGTTCTTAGTtggtgatgctggttctgacagtgacaaagatgacaatgatgatgctggttatgatggtgatgaaaatgacaatgaagatgagttggtagataactatgattCTAAAGAATGTGAGGAGTATAAGTTCTTTGAAAAAGTGTTTGCAGAAGATGGTGACTTGAGGAGATATTACGAGGACAATTATAGGGAAGGAGATTTTTATTGTTTGGTTTGTGGAGGTATAGGGAAGAAGGTGTGGAAGAGATTTAAGGATTGTGTTGCACTAATTCAGCACTCTACTACCATACTAAGGACAAAAAGGAAGCGAGCTCACAGGGCCTATGCACAGGTCATCTGCAAAGTTGTTGGTTGGGACATTGATCAATTGCCAGCTATTGTGTTAAAGGATTTGGATTCTTCCTTGGCAGGTTCAAGGAAGCTTTTGGTTGAACCCAAAAATCCTACTATGGGTTGTATTGAAGATTCAAATGGTGAACCTGATAATTCTACTGATGCTTAG 1671 0.3692 MKYLMKLKCKREAEHGSWKDQVGLGKAQKLETEERLYIVFVDTLTLTIEAFYFDSTLTLSLWEMEPIGSESFVKESENLDEKVLEMSLENGGEIVKASNESLASEWVCERPNAGVSSTASGWPSFDDIKSSSLAYSLSAEEQATVAVLQLQHKALEACQKFFVGDASSDGDEDDEDDEDESELEDNYDSKECEEYKFFEKVFAEDANLRRYYENNHREGDFYCLVCGGIGKKVWKRFKDCIALIHHSTAILRTKRRRAHRAYAQVICKVVGWDIDQLPAIVLKDLDSPLAGSRKLLSSVKEDENLDGKVLELSSENGGEIVKESHESMVSDAEWVCENPKAGVSSTASGWPSFDDIKSSSLIYSLSAEEKLTVAVLQLQHKALEACQKFLVGDAGSDSDKDDNDDAGYDGDENDNEDELVDNYDSKECEEYKFFEKVFAEDGDLRRYYEDNYREGDFYCLVCGGIGKKVWKRFKDCVALIQHSTTILRTKRKRAHRAYAQVICKVVGWDIDQLPAIVLKDLDSSLAGSRKLLVEPKNPTMGCIEDSNGEPDNSTDA 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01172 556 PANTHER - 405 537 - -
Cca10g01172 556 PANTHER - 64 406 - -
Cca10g01172 556 MobiDBLite consensus disorder prediction 395 419 - -
Cca10g01172 556 MobiDBLite consensus disorder prediction 537 556 - -
Cca10g01172 556 MobiDBLite consensus disorder prediction 398 419 - -
Cca10g01172 556 PANTHER OS06G0153600 PROTEIN 64 406 - -
Cca10g01172 556 MobiDBLite consensus disorder prediction 165 188 - -
Cca10g01172 556 MobiDBLite consensus disorder prediction 168 188 - -
Cca10g01172 556 PANTHER OS06G0153600 PROTEIN 405 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01172 Cca-Chr10 15058791 15063245 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01172 - - ccaj:109811915 1030.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01172 10 15058791 15063245 Cca10g01172 10 15058791 15063245 ECH