Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01166 ATGGCCCTCTCCGCCGTGAGGCAGCGGCGCCCTGAGGCGTCTGATCCGTCGCCGTCGCGACCGTACACGAAGCTCGACAAGCCTAAGAAATCGGAGGGAAAAGAGGAACAAGGGTTGGCGTGGTTTCTGCCATTCCTGGCCCTTGGAATTCTGAGGTACATGAGTGCCACTTCCAACCTCATCCACGATTGCGACGAGGTCTTCAACTACTGGGAACCCCTCCATTTCCTTCTCTACAAAACTGGCTTCCAGACATGGGAATACAGTTCGCAGTTTGCTCTTCGCTCGTATTTGTACCTTTTATTTCATGAAATAGTGGGTCGACCAGCTTCTTGGTTGTTTAGTGAGGACAAAGTGAGAGTGTTCTATGCTGTTAGATTCTTTCTGGGTCTTCTCTCTGTTTTAGTTGACACTGTTCTCGTGGTTGCTCTTTCAAGAAAGTATGGAAAGCGACTTGCTTCGTATGCACTTGCTATGCTGTGCTTAACCAGTGGCTGTTTCTTTGCTAGCACTAGTTTCTTGCCGAGTTCGTTTTCTATGTATGCAATATCTCTGGCATCAGGTTTATTTCTTCTGGATAAACCTGCTGCAGCAATTTCTGTTGCTGTTGTTGGTGTAATACTTGGCTGGCCTTTCTCAATCTTGGCTTTCCTTCCAGTGACACTATATTCTCTATCTAGAAAATTCAAACAGGCATTTATTGGCGGGGCTGTCTCATCAGTTATTCTTCTTGCACTGTCAATAGTTACGGACTTTTACTATTATGGAAAATGGACTTCATCTGTGTTGAATCTTTTAATATACAATGTAGCTGGAGGAGGTGAAAGCCATCTATATGGGACTGAAGGGCCTCTTTATTATCTGAGGAATGGATTTAACAATTTCAACTTTTGTTTTGTTCTTGCTATGCTGTTCTTGGGAATTTTGCCTATTGCAAAGAAGAAATATGCACCAGACCTACTGATTGTGATATCTCCTATATATATTTGGCTGGGGTTTATGTCTTTGCAGCCACACAAAGAAGAAAGGTTCCTTTATCCAATATATCCACTTATTTGTGTTGCTGCTTCAGCTGTCATTGAGAGCTTCCCTGATATTTTCCGTAGCAAATATAATCCATACGATCCTTCTATAATAGTGACAATTGCCAAAGTTTTGAGACCAGTGGCTCTTAGCCTTATACTATATGCTTCTCATGCTCGTACGTTTTCTCTGATTAATGGTTACTCAGCTCCCTTGGAGGTTTACAAGATTTTGGAACACCATCACGCAGATAACAATTCCATACTCTGTGTTGGAAGTGAATGGCATCGCTTTCCATCATCATTTTTCATCCCAGATTATGTGGGACAAGTTCGATGGATTGACGATGGATTCCGAGGCCTTCTTCCCCTCCCATTTAATTCTACCCTAGGGGGGACTGCAGCAGCACCGCCATATTTTAACAACAAAAACATAGCATCAGACAAGCAATACCTCCATGATGTTGATGCCTGTACTTTCCTTGTCGAGCTGCAACTAAAGCGGCCTTACCTGACTCGTGGAAGTAACATGTCAGAATGGGAGGCTATTGCTGCATTGCCTTATCTGGACAGGGAGCTTTCACCGGCATTGTATAGGTCTTTTTTCATTCCTTACCTTTGGCAAGAGAAGAATGTTTTTGGCATGTATAAACTGCTCAAAAGAGTAACCACGTGA 1698 0.4335 MALSAVRQRRPEASDPSPSRPYTKLDKPKKSEGKEEQGLAWFLPFLALGILRYMSATSNLIHDCDEVFNYWEPLHFLLYKTGFQTWEYSSQFALRSYLYLLFHEIVGRPASWLFSEDKVRVFYAVRFFLGLLSVLVDTVLVVALSRKYGKRLASYALAMLCLTSGCFFASTSFLPSSFSMYAISLASGLFLLDKPAAAISVAVVGVILGWPFSILAFLPVTLYSLSRKFKQAFIGGAVSSVILLALSIVTDFYYYGKWTSSVLNLLIYNVAGGGESHLYGTEGPLYYLRNGFNNFNFCFVLAMLFLGILPIAKKKYAPDLLIVISPIYIWLGFMSLQPHKEERFLYPIYPLICVAASAVIESFPDIFRSKYNPYDPSIIVTIAKVLRPVALSLILYASHARTFSLINGYSAPLEVYKILEHHHADNNSILCVGSEWHRFPSSFFIPDYVGQVRWIDDGFRGLLPLPFNSTLGGTAAAPPYFNNKNIASDKQYLHDVDACTFLVELQLKRPYLTRGSNMSEWEAIAALPYLDRELSPALYRSFFIPYLWQEKNVFGMYKLLKRVTT 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01166 565 Pfam Alg9-like mannosyltransferase family 45 446 IPR005599 GO:0016757
Cca10g01166 565 PANTHER GLYCOSYLTRANSFERASE 45 562 IPR005599 GO:0016757
Cca10g01166 565 PANTHER ALPHA-1,2-MANNOSYLTRANSFERASE ALG9 45 562 IPR039484 GO:0000030
Cca10g01166 565 MobiDBLite consensus disorder prediction 1 31 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01166 1 563 Glycosyltransferase AT1G16900 72.759 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01166 K03846 - gmx:100805971 1055.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01166 10 14963335 14968757 Cca10g01166 10 14963335 14968757 ECH